RLUE_VIBVU
ID RLUE_VIBVU Reviewed; 234 AA.
AC Q8DAS3;
DT 15-AUG-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2003, sequence version 1.
DT 25-MAY-2022, entry version 101.
DE RecName: Full=Ribosomal large subunit pseudouridine synthase E;
DE EC=5.4.99.20;
DE AltName: Full=rRNA pseudouridylate synthase E;
DE AltName: Full=rRNA-uridine isomerase E;
GN Name=rluE; OrderedLocusNames=VV1_2116;
OS Vibrio vulnificus (strain CMCP6).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=216895;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CMCP6;
RA Rhee J.H., Kim S.Y., Chung S.S., Kim J.J., Moon Y.H., Jeong H., Choy H.E.;
RT "Complete genome sequence of Vibrio vulnificus CMCP6.";
RL Submitted (DEC-2002) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Responsible for synthesis of pseudouridine from uracil-2457
CC in 23S ribosomal RNA. {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=uridine(2457) in 23S rRNA = pseudouridine(2457) in 23S rRNA;
CC Xref=Rhea:RHEA:38871, Rhea:RHEA-COMP:10091, Rhea:RHEA-COMP:10092,
CC ChEBI:CHEBI:65314, ChEBI:CHEBI:65315; EC=5.4.99.20;
CC -!- SIMILARITY: Belongs to the pseudouridine synthase RsuA family.
CC {ECO:0000305}.
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DR EMBL; AE016795; AAO10504.1; -; Genomic_DNA.
DR RefSeq; WP_011080000.1; NC_004459.3.
DR AlphaFoldDB; Q8DAS3; -.
DR SMR; Q8DAS3; -.
DR EnsemblBacteria; AAO10504; AAO10504; VV1_2116.
DR KEGG; vvu:VV1_2116; -.
DR HOGENOM; CLU_024979_8_0_6; -.
DR OMA; HPRTYWV; -.
DR Proteomes; UP000002275; Chromosome 1.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0120159; F:rRNA pseudouridine synthase activity; IEA:UniProtKB-EC.
DR GO; GO:0001522; P:pseudouridine synthesis; IEA:InterPro.
DR GO; GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
DR Gene3D; 3.30.70.1560; -; 1.
DR Gene3D; 3.30.70.580; -; 1.
DR InterPro; IPR042092; PsdUridine_s_RsuA/RluB/E/F_cat.
DR InterPro; IPR020103; PsdUridine_synth_cat_dom_sf.
DR InterPro; IPR006145; PsdUridine_synth_RsuA/RluA.
DR InterPro; IPR000748; PsdUridine_synth_RsuA/RluB/E/F.
DR InterPro; IPR018496; PsdUridine_synth_RsuA/RluB_CS.
DR InterPro; IPR020094; TruA/RsuA/RluB/E/F_N.
DR Pfam; PF00849; PseudoU_synth_2; 1.
DR SUPFAM; SSF55120; SSF55120; 1.
DR TIGRFAMs; TIGR00093; TIGR00093; 1.
DR PROSITE; PS01149; PSI_RSU; 1.
PE 3: Inferred from homology;
KW Isomerase; rRNA processing.
FT CHAIN 1..234
FT /note="Ribosomal large subunit pseudouridine synthase E"
FT /id="PRO_0000100012"
FT REGION 1..49
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..33
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT ACT_SITE 95
FT /note="Nucleophile"
FT /evidence="ECO:0000250"
SQ SEQUENCE 234 AA; 26401 MW; D3CB29B218EEE644 CRC64;
MSFRSSSTSP RSNKQTATKR FKQSGQAQSV GSPKRHSVKR KNNEQSKKSL SLAERKIIIF
NKPYDTLSQF TDGEGRKTLA DFIPVKEVYA AGRLDRDSEG LMVLTNDGIL QAKLTQPKSK
SPKTYWVQVE GAPTEAQLEP LRRGVELKDG LTLPAQVEII QDPQLWERNP PVRFRAAIPT
TWLAITIIEG RNRQVRRMTA HIGFPTLRLV RYSMGGMTLQ DLQPGEWKEI SLPS