RM02_ARATH
ID RM02_ARATH Reviewed; 349 AA.
AC P93311; Q33885; Q8S887;
DT 01-MAR-2004, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-1997, sequence version 1.
DT 03-AUG-2022, entry version 138.
DE RecName: Full=60S ribosomal protein L2, mitochondrial;
GN Name=RPL2; OrderedLocusNames=AtMg00560;
OS Arabidopsis thaliana (Mouse-ear cress).
OG Mitochondrion.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. C24;
RX PubMed=8988169; DOI=10.1038/ng0197-57;
RA Unseld M., Marienfeld J.R., Brandt P., Brennicke A.;
RT "The mitochondrial genome of Arabidopsis thaliana contains 57 genes in
RT 366,924 nucleotides.";
RL Nat. Genet. 15:57-61(1997).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA] (AT2G07715).
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [3]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-306.
RC STRAIN=cv. C24;
RA Schuster W.;
RL Submitted (NOV-1994) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Mitochondrion.
CC -!- MISCELLANEOUS: A stretch of 270 kb of the mitochondrial genome is
CC duplicated within the centromere of chromosome 2 resulting in the
CC duplication of the gene. The expression of this duplicated gene
CC (At2g07715) is not demonstrated.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL2 family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAM15498.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; Y08501; CAA69740.1; -; Genomic_DNA.
DR EMBL; AC007729; AAM15498.1; ALT_SEQ; Genomic_DNA.
DR EMBL; X82565; CAA57911.1; -; Genomic_DNA.
DR PIR; S49606; S49606.
DR RefSeq; NP_085516.1; NC_001284.2.
DR PDB; 6XYW; EM; 3.86 A; Aa=1-349.
DR PDBsum; 6XYW; -.
DR AlphaFoldDB; P93311; -.
DR IntAct; P93311; 1.
DR STRING; 3702.ATMG00560.1; -.
DR PaxDb; P93311; -.
DR PRIDE; P93311; -.
DR EnsemblPlants; ATMG00560.1; ATMG00560.1; ATMG00560.
DR Gramene; ATMG00560.1; ATMG00560.1; ATMG00560.
DR Araport; ATMG00560; -.
DR TAIR; locus:504954539; ATMG00560.
DR eggNOG; KOG0438; Eukaryota.
DR HOGENOM; CLU_059818_0_0_1; -.
DR InParanoid; P93311; -.
DR OMA; GACKVDR; -.
DR OrthoDB; 1412917at2759; -.
DR PRO; PR:P93311; -.
DR Proteomes; UP000006548; Mitochondrion (cv. C24).
DR ExpressionAtlas; P93311; baseline and differential.
DR Genevisible; P93311; AT.
DR GO; GO:0005762; C:mitochondrial large ribosomal subunit; IBA:GO_Central.
DR GO; GO:0005739; C:mitochondrion; TAS:TAIR.
DR GO; GO:0003729; F:mRNA binding; HDA:TAIR.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0032543; P:mitochondrial translation; IBA:GO_Central.
DR Gene3D; 2.40.50.140; -; 1.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR022666; Rbsml_prot_L2_RNA-bd_dom.
DR InterPro; IPR002171; Ribosomal_L2.
DR PANTHER; PTHR13691; PTHR13691; 1.
DR Pfam; PF00181; Ribosomal_L2; 1.
DR SMART; SM01383; Ribosomal_L2; 1.
DR SUPFAM; SSF50249; SSF50249; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Mitochondrion; Reference proteome; Ribonucleoprotein;
KW Ribosomal protein.
FT CHAIN 1..349
FT /note="60S ribosomal protein L2, mitochondrial"
FT /id="PRO_0000129736"
FT CONFLICT 41
FT /note="L -> Q (in Ref. 3; CAA57911)"
FT /evidence="ECO:0000305"
FT CONFLICT 78..79
FT /note="GC -> AA (in Ref. 3; CAA57911)"
FT /evidence="ECO:0000305"
FT CONFLICT 174
FT /note="P -> L (in Ref. 2; AAM15498)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 349 AA; 37913 MW; B33EBE51681B4D59 CRC64;
MRPGRARALR QFTLSTGKSA GRNSSGRITV FHRGGGSKRL LRRIDLKRST SSMGIVESIE
YDPNRSSQIA PVRWIKGGCQ KKMNTIEKFA PPRKILEPTT NTISGLFSFS FLPGKVDKRK
VACFSPGLMA AYVVVGLPTG MPPLSSSKSA FASKGAGSTK TLVKDVFFSA FSSPKAKRET
ASLAFASSFG FPRIAVAGAK PAFFAPRMRQ KVRGKSTFSL CEVQKGRTHS ILWAHRIKGK
AGLSWQSFRR QDTLGLVGAA GHKKSKPKTD QGNLPAKPIG ERAKQLKALR GLRAKDGACK
VDRAPVTYII ASHQLEAGKM VMNCDWSKPS TSSFLQSAQN DHPKPLFTV