ID   RM04_COCIM              Reviewed;         245 AA.
AC   Q1DNY5; J3K582;
DT   05-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT   11-JUL-2006, sequence version 1.
DT   25-MAY-2022, entry version 62.
DE   RecName: Full=54S ribosomal protein L4, mitochondrial;
DE   Flags: Precursor;
GN   Name=MRPL4; ORFNames=CIMG_07978;
OS   Coccidioides immitis (strain RS) (Valley fever fungus).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC   Eurotiomycetidae; Onygenales; Onygenaceae; Coccidioides.
OX   NCBI_TaxID=246410;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=RS;
RX   PubMed=19717792; DOI=10.1101/gr.087551.108;
RA   Sharpton T.J., Stajich J.E., Rounsley S.D., Gardner M.J., Wortman J.R.,
RA   Jordar V.S., Maiti R., Kodira C.D., Neafsey D.E., Zeng Q., Hung C.-Y.,
RA   McMahan C., Muszewska A., Grynberg M., Mandel M.A., Kellner E.M.,
RA   Barker B.M., Galgiani J.N., Orbach M.J., Kirkland T.N., Cole G.T.,
RA   Henn M.R., Birren B.W., Taylor J.W.;
RT   "Comparative genomic analyses of the human fungal pathogens Coccidioides
RT   and their relatives.";
RL   Genome Res. 19:1722-1731(2009).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=RS;
RX   PubMed=20516208; DOI=10.1101/gr.103911.109;
RA   Neafsey D.E., Barker B.M., Sharpton T.J., Stajich J.E., Park D.J.,
RA   Whiston E., Hung C.-Y., McMahan C., White J., Sykes S., Heiman D.,
RA   Young S., Zeng Q., Abouelleil A., Aftuck L., Bessette D., Brown A.,
RA   FitzGerald M., Lui A., Macdonald J.P., Priest M., Orbach M.J.,
RA   Galgiani J.N., Kirkland T.N., Cole G.T., Birren B.W., Henn M.R.,
RA   Taylor J.W., Rounsley S.D.;
RT   "Population genomic sequencing of Coccidioides fungi reveals recent
RT   hybridization and transposon control.";
RL   Genome Res. 20:938-946(2010).
CC   -!- SUBUNIT: Component of the mitochondrial large ribosomal subunit. Mature
CC       mitochondrial ribosomes consist of a small (37S) and a large (54S)
CC       subunit. The 37S subunit contains at least 33 different proteins and 1
CC       molecule of RNA (15S). The 54S subunit contains at least 45 different
CC       proteins and 1 molecule of RNA (21S) (By similarity). {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000250}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uL29 family.
CC       {ECO:0000305}.
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DR   EMBL; GG704913; EAS29232.3; -; Genomic_DNA.
DR   RefSeq; XP_001240815.1; XM_001240814.2.
DR   AlphaFoldDB; Q1DNY5; -.
DR   SMR; Q1DNY5; -.
DR   STRING; 246410.Q1DNY5; -.
DR   EnsemblFungi; EAS29232; EAS29232; CIMG_07978.
DR   GeneID; 4559418; -.
DR   KEGG; cim:CIMG_07978; -.
DR   VEuPathDB; FungiDB:CIMG_07978; -.
DR   InParanoid; Q1DNY5; -.
DR   OMA; HRLWWVC; -.
DR   OrthoDB; 1072631at2759; -.
DR   Proteomes; UP000001261; Unassembled WGS sequence.
DR   GO; GO:0005761; C:mitochondrial ribosome; IEA:InterPro.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:InterPro.
DR   Gene3D; 6.10.330.20; -; 1.
DR   InterPro; IPR038340; MRP-L47_sf.
DR   InterPro; IPR010729; Ribosomal_L47_mit.
DR   PANTHER; PTHR21183; PTHR21183; 1.
DR   Pfam; PF06984; MRP-L47; 1.
PE   3: Inferred from homology;
KW   Mitochondrion; Reference proteome; Ribonucleoprotein; Ribosomal protein;
KW   Transit peptide.
FT   TRANSIT         1..?
FT                   /note="Mitochondrion"
FT                   /evidence="ECO:0000255"
FT   CHAIN           ?..245
FT                   /note="54S ribosomal protein L4, mitochondrial"
FT                   /id="PRO_0000372399"
FT   REGION          36..99
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          207..245
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        36..53
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   245 AA;  27908 MW;  DAC57B8637EC9301 CRC64;
     MASRSVISFL YQQGGLSLAE LPPAFLAPAL YSTKASFNSQ RSQFSTSSSP AARDRSRFRG
     VSAIHRTGPK QPLPVSKYPL PKPASPEQQE KRPANPDHGL WGFFGPNKQA IPTPEEEYAH
     GRAWTIQELR QKSWDDLHCL WWVTVRERNR IATSNYERKR LAAGYGDFEA DNRDKTVRAT
     QHAIKHVLRE RWYAWNEARE LYNGGYRPSP DEVLEEETET AMPTEVMPEE LDSSTKSETT
     TSKNI