ID   RM09_BOVIN              Reviewed;         268 AA.
AC   Q2TBK2;
DT   26-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT   26-FEB-2008, sequence version 2.
DT   03-AUG-2022, entry version 97.
DE   RecName: Full=39S ribosomal protein L9, mitochondrial;
DE            Short=L9mt;
DE            Short=MRP-L9;
DE   Flags: Precursor;
GN   Name=MRPL9;
OS   Bos taurus (Bovine).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
OX   NCBI_TaxID=9913;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
RC   STRAIN=Korean; TISSUE=Skeletal muscle;
RA   Yoon D.-H., Lee S.-H., Park E.-W., Cho Y.-M., Lee J.-H., Kim H., Kim H.-Y.,
RA   Park J.-H., Oh S.-J.;
RT   "Gene expression profiling of the bovine liver, adipose, and skeletal
RT   muscle.";
RL   Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases.
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
RC   STRAIN=Crossbred X Angus; TISSUE=Liver;
RG   NIH - Mammalian Gene Collection (MGC) project;
RL   Submitted (NOV-2005) to the EMBL/GenBank/DDBJ databases.
RN   [3]
RP   PROTEIN SEQUENCE OF 53-68, IDENTIFICATION BY MASS SPECTROMETRY, SUBCELLULAR
RP   LOCATION, AND SUBUNIT.
RX   PubMed=11279069; DOI=10.1074/jbc.m100432200;
RA   Suzuki T., Terasaki M., Takemoto-Hori C., Hanada T., Ueda T., Wada A.,
RA   Watanabe K.;
RT   "Structural compensation for the deficit of rRNA with proteins in the
RT   mammalian mitochondrial ribosome. Systematic analysis of protein components
RT   of the large ribosomal subunit from mammalian mitochondria.";
RL   J. Biol. Chem. 276:21724-21736(2001).
CC   -!- SUBUNIT: Component of the mitochondrial ribosome large subunit (39S)
CC       which comprises a 16S rRNA and about 50 distinct proteins.
CC       {ECO:0000269|PubMed:11279069}.
CC   -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000269|PubMed:11279069}.
CC   -!- ALTERNATIVE PRODUCTS:
CC       Event=Alternative splicing; Named isoforms=2;
CC       Name=1;
CC         IsoId=Q2TBK2-1; Sequence=Displayed;
CC       Name=2;
CC         IsoId=Q2TBK2-2; Sequence=VSP_031859, VSP_031860;
CC   -!- SIMILARITY: Belongs to the bacterial ribosomal protein bL9 family.
CC       {ECO:0000305}.
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DR   EMBL; DV796567; -; NOT_ANNOTATED_CDS; mRNA.
DR   EMBL; BC110017; AAI10018.1; -; mRNA.
DR   RefSeq; NP_001030201.2; NM_001035029.2. [Q2TBK2-2]
DR   RefSeq; XP_005203916.1; XM_005203859.2. [Q2TBK2-1]
DR   AlphaFoldDB; Q2TBK2; -.
DR   SMR; Q2TBK2; -.
DR   STRING; 9913.ENSBTAP00000001054; -.
DR   iPTMnet; Q2TBK2; -.
DR   PaxDb; Q2TBK2; -.
DR   PRIDE; Q2TBK2; -.
DR   Ensembl; ENSBTAT00000001054; ENSBTAP00000001054; ENSBTAG00000000797. [Q2TBK2-2]
DR   GeneID; 505981; -.
DR   KEGG; bta:505981; -.
DR   CTD; 65005; -.
DR   VEuPathDB; HostDB:ENSBTAG00000000797; -.
DR   eggNOG; KOG4607; Eukaryota.
DR   GeneTree; ENSGT00390000008281; -.
DR   HOGENOM; CLU_078938_0_0_1; -.
DR   InParanoid; Q2TBK2; -.
DR   OMA; PMSLVPY; -.
DR   OrthoDB; 1036760at2759; -.
DR   TreeFam; TF300170; -.
DR   Proteomes; UP000009136; Chromosome 3.
DR   Bgee; ENSBTAG00000000797; Expressed in gluteus medius and 108 other tissues.
DR   ExpressionAtlas; Q2TBK2; baseline and differential.
DR   GO; GO:0005743; C:mitochondrial inner membrane; TAS:Reactome.
DR   GO; GO:0005762; C:mitochondrial large ribosomal subunit; ISS:UniProtKB.
DR   GO; GO:0005739; C:mitochondrion; ISS:UniProtKB.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:InterPro.
DR   Gene3D; 3.40.5.10; -; 1.
DR   InterPro; IPR000244; Ribosomal_L9.
DR   InterPro; IPR009027; Ribosomal_L9/RNase_H1_N.
DR   InterPro; IPR020070; Ribosomal_L9_N.
DR   InterPro; IPR036935; Ribosomal_L9_N_sf.
DR   PANTHER; PTHR21368; PTHR21368; 1.
DR   Pfam; PF01281; Ribosomal_L9_N; 1.
DR   SUPFAM; SSF55658; SSF55658; 1.
PE   1: Evidence at protein level;
KW   Alternative splicing; Direct protein sequencing; Mitochondrion;
KW   Reference proteome; Ribonucleoprotein; Ribosomal protein; Transit peptide.
FT   TRANSIT         1..52
FT                   /note="Mitochondrion"
FT                   /evidence="ECO:0000269|PubMed:11279069"
FT   CHAIN           53..268
FT                   /note="39S ribosomal protein L9, mitochondrial"
FT                   /id="PRO_0000322569"
FT   VAR_SEQ         218..235
FT                   /note="EYWCEVTVNGLDTVRVPM -> KWTGHCEGTYVRGEL (in isoform
FT                   2)"
FT                   /evidence="ECO:0000303|Ref.2"
FT                   /id="VSP_031859"
FT   VAR_SEQ         236..268
FT                   /note="Missing (in isoform 2)"
FT                   /evidence="ECO:0000303|Ref.2"
FT                   /id="VSP_031860"
SQ   SEQUENCE   268 AA;  30524 MW;  FA37CA6165F7E23E CRC64;
     MAAAAFAVPR GVQLRVLTER LLRGGVRELL RPRLSGSTPG SERDFSLSHS RGTVIVERWW
     KVPLAGEGRK PRLHRRHRVY KLVEDTKHRP KENLELILTQ SVDELGVRGD LVSVKKSVGR
     NRLLPEGLAV YASPENKKLF EEEKLLRQEG KLDKIQTKAG EATVKFLRSC HLEVGMKNNV
     KWELNPEIVA RHFLRNLGVV VAPHALKLPE EPITQRGEYW CEVTVNGLDT VRVPMSVVNF
     ERPKTKRYKY WLAQQAAKGM ASTSFQKI