RM16_ORYSJ
ID RM16_ORYSJ Reviewed; 185 AA.
AC P46801;
DT 01-NOV-1995, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1995, sequence version 1.
DT 03-AUG-2022, entry version 100.
DE RecName: Full=60S ribosomal protein L16, mitochondrial;
GN Name=RPL16;
OS Oryza sativa subsp. japonica (Rice).
OG Mitochondrion.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=cv. Nipponbare; TISSUE=Leaf;
RX PubMed=7788722; DOI=10.1007/bf00313433;
RA Nakazono M., Itadani H., Wakasugi T., Tsutsumi N., Sugiura M., Hirai A.;
RT "The rps3-rpl16-nad3-rps12 gene cluster in rice mitochondrial DNA is
RT transcribed from alternative promoters.";
RL Curr. Genet. 27:184-189(1995).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12471441; DOI=10.1007/s00438-002-0767-1;
RA Notsu Y., Masood S., Nishikawa T., Kubo N., Akiduki G., Nakazono M.,
RA Hirai A., Kadowaki K.;
RT "The complete sequence of the rice (Oryza sativa L.) mitochondrial genome:
RT frequent DNA sequence acquisition and loss during the evolution of
RT flowering plants.";
RL Mol. Genet. Genomics 268:434-445(2002).
RN [3]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 42-185.
RC STRAIN=cv. Nipponbare;
RX PubMed=7545979; DOI=10.1093/oxfordjournals.pcp.a078718;
RA Itadani H., Wakasugi T., Sugita M., Sugiura M., Nakazono M., Hirai A.;
RT "Nucleotide sequence of a 28-kbp portion of rice mitochondrial DNA: the
RT existence of many sequences that correspond to parts of mitochondrial genes
RT in intergenic regions.";
RL Plant Cell Physiol. 35:1239-1244(1994).
CC -!- SUBCELLULAR LOCATION: Mitochondrion.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL16 family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAA06833.1; Type=Erroneous termination; Note=Extended C-terminus.; Evidence={ECO:0000305};
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DR EMBL; D21251; BAA04793.1; -; Genomic_DNA.
DR EMBL; BA000029; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; D32052; BAA06833.1; ALT_SEQ; Genomic_DNA.
DR PIR; T03233; T03233.
DR AlphaFoldDB; P46801; -.
DR SMR; P46801; -.
DR STRING; 39947.P46801; -.
DR PaxDb; P46801; -.
DR PRIDE; P46801; -.
DR InParanoid; P46801; -.
DR Proteomes; UP000059680; Mitochondrion.
DR GO; GO:0005762; C:mitochondrial large ribosomal subunit; IBA:GO_Central.
DR GO; GO:0005739; C:mitochondrion; ISS:Gramene.
DR GO; GO:0019843; F:rRNA binding; IBA:GO_Central.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0032543; P:mitochondrial translation; IBA:GO_Central.
DR CDD; cd01433; Ribosomal_L16_L10e; 1.
DR Gene3D; 3.90.1170.10; -; 1.
DR InterPro; IPR016180; Ribosomal_L10e/L16.
DR InterPro; IPR036920; Ribosomal_L10e/L16_sf.
DR InterPro; IPR000114; Ribosomal_L16.
DR InterPro; IPR020798; Ribosomal_L16_CS.
DR PANTHER; PTHR12220; PTHR12220; 1.
DR Pfam; PF00252; Ribosomal_L16; 1.
DR PRINTS; PR00060; RIBOSOMALL16.
DR SUPFAM; SSF54686; SSF54686; 1.
DR TIGRFAMs; TIGR01164; rplP_bact; 1.
DR PROSITE; PS00586; RIBOSOMAL_L16_1; 1.
DR PROSITE; PS00701; RIBOSOMAL_L16_2; 1.
PE 3: Inferred from homology;
KW Mitochondrion; Reference proteome; Ribonucleoprotein; Ribosomal protein.
FT CHAIN 1..185
FT /note="60S ribosomal protein L16, mitochondrial"
FT /id="PRO_0000062326"
SQ SEQUENCE 185 AA; 20962 MW; 5FA75CDEF4C88539 CRC64;
MEKHLVMYLT RKSIMLLRKY PLVTEFQVSK CGSHIVKIRR DVLYPKRTKY SKYSKCRCSR
GCEPDGTQLG FGRYGTKSCR AGRLSYRAIE AARRATIGQF HRAMSGQFRR NCKIWVRVLA
DLPITGKPAE VRMGRGKGNP TGWIARVSTG QIPFEMDGVS LSNARQAARL AAHKPCSSTK
FVQWS