RM36_DANRE
ID RM36_DANRE Reviewed; 116 AA.
AC Q1LWG3; A5PLD3;
DT 22-SEP-2009, integrated into UniProtKB/Swiss-Prot.
DT 30-MAY-2006, sequence version 1.
DT 03-AUG-2022, entry version 86.
DE RecName: Full=39S ribosomal protein L36, mitochondrial;
DE Short=L36mt;
DE Short=MRP-L36;
DE Flags: Precursor;
GN Name=mrpl36; ORFNames=si:dkey-261i16.3;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen;
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M.,
RA Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I.,
RA Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.,
RA White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y.,
RA Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B.,
RA Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S.,
RA Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S.,
RA Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N.,
RA Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J.,
RA Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J.,
RA Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D.,
RA McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S.,
RA Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E.,
RA Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A.,
RA Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P.,
RA Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C.,
RA Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C.,
RA Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M.,
RA Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C., Raddatz G.,
RA Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F.,
RA Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M.,
RA Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M.,
RA de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C.,
RA Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the human
RT genome.";
RL Nature 496:498-503(2013).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Eye;
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBUNIT: Component of the mitochondrial ribosome large subunit (39S)
CC which comprises a 16S rRNA and about 50 distinct proteins.
CC {ECO:0000250|UniProtKB:Q9P0J6}.
CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000250|UniProtKB:Q9P0J6}.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bL36 family.
CC {ECO:0000305}.
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DR EMBL; BX571830; CAK10869.1; -; Genomic_DNA.
DR EMBL; BC142854; AAI42855.1; -; mRNA.
DR RefSeq; NP_001092727.1; NM_001099257.1.
DR AlphaFoldDB; Q1LWG3; -.
DR SMR; Q1LWG3; -.
DR STRING; 7955.ENSDARP00000094638; -.
DR PaxDb; Q1LWG3; -.
DR Ensembl; ENSDART00000103862; ENSDARP00000094638; ENSDARG00000070607.
DR GeneID; 100093703; -.
DR KEGG; dre:100093703; -.
DR CTD; 64979; -.
DR ZFIN; ZDB-GENE-060503-821; mrpl36.
DR eggNOG; KOG4122; Eukaryota.
DR GeneTree; ENSGT00390000010866; -.
DR HOGENOM; CLU_135723_1_1_1; -.
DR InParanoid; Q1LWG3; -.
DR OMA; CIQPCAG; -.
DR OrthoDB; 1640375at2759; -.
DR PhylomeDB; Q1LWG3; -.
DR TreeFam; TF300275; -.
DR Reactome; R-DRE-5389840; Mitochondrial translation elongation.
DR Reactome; R-DRE-5419276; Mitochondrial translation termination.
DR PRO; PR:Q1LWG3; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Chromosome 19.
DR Bgee; ENSDARG00000070607; Expressed in liver and 29 other tissues.
DR GO; GO:0005762; C:mitochondrial large ribosomal subunit; ISS:UniProtKB.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0042254; P:ribosome biogenesis; IBA:GO_Central.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR HAMAP; MF_00251; Ribosomal_L36; 1.
DR InterPro; IPR000473; Ribosomal_L36.
DR InterPro; IPR035977; Ribosomal_L36_sp.
DR Pfam; PF00444; Ribosomal_L36; 1.
DR SUPFAM; SSF57840; SSF57840; 1.
DR TIGRFAMs; TIGR01022; rpmJ_bact; 1.
DR PROSITE; PS00828; RIBOSOMAL_L36; 1.
PE 3: Inferred from homology;
KW Mitochondrion; Reference proteome; Ribonucleoprotein; Ribosomal protein;
KW Transit peptide.
FT TRANSIT 1..?
FT /note="Mitochondrion"
FT /evidence="ECO:0000255"
FT CHAIN ?..116
FT /note="39S ribosomal protein L36, mitochondrial"
FT /id="PRO_0000383808"
FT CONFLICT 13
FT /note="Q -> H (in Ref. 2; AAI42855)"
FT /evidence="ECO:0000305"
FT CONFLICT 24
FT /note="L -> V (in Ref. 2; AAI42855)"
FT /evidence="ECO:0000305"
FT CONFLICT 51..52
FT /note="PM -> LK (in Ref. 2; AAI42855)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 116 AA; 12944 MW; 2F6A4CCBB2C0AD39 CRC64;
MLLRSLVGSL TRQWSQFARC AASLSLPAVG AQRCLSTITA AAVPFRAVVN PMFKPHTAFL
SPLLGRCQQL LCVQPSAGMK TKSALKKRCN ECFFVRRRGR LFVFCKAHPR HKQRQG
