RMD9_CANAL
ID RMD9_CANAL Reviewed; 613 AA.
AC Q5A2V2; A0A1D8PKK8;
DT 11-SEP-2007, integrated into UniProtKB/Swiss-Prot.
DT 26-APR-2005, sequence version 1.
DT 25-MAY-2022, entry version 81.
DE RecName: Full=RNA-binding protein RMD9, mitochondrial {ECO:0000250|UniProtKB:P53140};
DE Flags: Precursor;
GN Name=RMD9; OrderedLocusNames=CAALFM_C306700CA; ORFNames=CaO19.7459;
OS Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida.
OX NCBI_TaxID=237561;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SC5314 / ATCC MYA-2876;
RX PubMed=15123810; DOI=10.1073/pnas.0401648101;
RA Jones T., Federspiel N.A., Chibana H., Dungan J., Kalman S., Magee B.B.,
RA Newport G., Thorstenson Y.R., Agabian N., Magee P.T., Davis R.W.,
RA Scherer S.;
RT "The diploid genome sequence of Candida albicans.";
RL Proc. Natl. Acad. Sci. U.S.A. 101:7329-7334(2004).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=SC5314 / ATCC MYA-2876;
RX PubMed=17419877; DOI=10.1186/gb-2007-8-4-r52;
RA van het Hoog M., Rast T.J., Martchenko M., Grindle S., Dignard D.,
RA Hogues H., Cuomo C., Berriman M., Scherer S., Magee B.B., Whiteway M.,
RA Chibana H., Nantel A., Magee P.T.;
RT "Assembly of the Candida albicans genome into sixteen supercontigs aligned
RT on the eight chromosomes.";
RL Genome Biol. 8:RESEARCH52.1-RESEARCH52.12(2007).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], AND GENOME REANNOTATION.
RC STRAIN=SC5314 / ATCC MYA-2876;
RX PubMed=24025428; DOI=10.1186/gb-2013-14-9-r97;
RA Muzzey D., Schwartz K., Weissman J.S., Sherlock G.;
RT "Assembly of a phased diploid Candida albicans genome facilitates allele-
RT specific measurements and provides a simple model for repeat and indel
RT structure.";
RL Genome Biol. 14:RESEARCH97.1-RESEARCH97.14(2013).
CC -!- FUNCTION: Binds the 3'-UTR of mitochondrial mRNAs (By similarity).
CC Involved in the processing or stability of mitochondrial mRNAs (By
CC similarity). {ECO:0000250|UniProtKB:P53140}.
CC -!- SUBUNIT: Monomer. {ECO:0000250|UniProtKB:P53140}.
CC -!- SUBCELLULAR LOCATION: Mitochondrion inner membrane
CC {ECO:0000250|UniProtKB:P53140}; Peripheral membrane protein
CC {ECO:0000250|UniProtKB:P53140}; Matrix side
CC {ECO:0000250|UniProtKB:P53140}.
CC -!- PTM: Phosphorylated. Phosphorylation promotes binding to RNA.
CC {ECO:0000250|UniProtKB:P53140}.
CC -!- SIMILARITY: Belongs to the RMD9 family. {ECO:0000305}.
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DR EMBL; CP017625; AOW28676.1; -; Genomic_DNA.
DR RefSeq; XP_716120.1; XM_711027.1.
DR AlphaFoldDB; Q5A2V2; -.
DR SMR; Q5A2V2; -.
DR BioGRID; 1225341; 1.
DR STRING; 237561.Q5A2V2; -.
DR GeneID; 3642247; -.
DR KEGG; cal:CAALFM_C306700CA; -.
DR CGD; CAL0000189293; orf19.7459.
DR VEuPathDB; FungiDB:C3_06700C_A; -.
DR eggNOG; ENOG502QUSW; Eukaryota.
DR HOGENOM; CLU_019840_1_0_1; -.
DR InParanoid; Q5A2V2; -.
DR OMA; HIYELNT; -.
DR OrthoDB; 321092at2759; -.
DR Proteomes; UP000000559; Chromosome 3.
DR GO; GO:0005743; C:mitochondrial inner membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0044182; P:filamentous growth of a population of unicellular organisms; IMP:CGD.
DR GO; GO:0036178; P:filamentous growth of a population of unicellular organisms in response to neutral pH; IMP:CGD.
DR GO; GO:0044011; P:single-species biofilm formation on inanimate substrate; IMP:CGD.
DR GO; GO:0030435; P:sporulation resulting in formation of a cellular spore; IEA:UniProtKB-KW.
DR Gene3D; 1.25.40.10; -; 1.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
PE 3: Inferred from homology;
KW Membrane; Mitochondrion; Mitochondrion inner membrane; Phosphoprotein;
KW Reference proteome; Sporulation; Transit peptide.
FT TRANSIT 1..58
FT /note="Mitochondrion"
FT /evidence="ECO:0000255"
FT CHAIN 59..613
FT /note="RNA-binding protein RMD9, mitochondrial"
FT /id="PRO_0000301782"
FT REGION 15..39
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 20..39
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 613 AA; 70286 MW; F0D1813C808E9615 CRC64;
MFRLIASGAQ QGLRPSLISK VKPPTTTTTT STTSKFTSTT QHFPFENNNL LGYQVRNNSS
QAGVASEPKI SLPETDVYQQ KLLKYNIKKH EPYHLKFNPK TKNQRNNDSA SSFSIDEFSQ
LLQDETFRNQ LNEKHLFVYA SNLYSGTINS RRARLNKSKN RDKDQRSAFR EDMTLQSAVL
NLTEIISTGE LNSVLSARTL FKVFGTLLQF KLNDEIVNLW ETGVNSDVGK LYLAHEVLSI
VIQVGHETRR FNYDEIKQIY EMSVKEDKTV HPYLSDRMGQ VAVMEGDYVT ALDALESLMN
LYEQNPNEKS VLGALAQIHL SFIGHSKDLA IAERFFEKGL QKEGLPYSVI MKAPYMTSFL
SNCIAGGYSM EEVIDFWRRI SKHYLEQDFD LISSQSTLHA GFFKSFFEKY PEPSKEAIDL
LNLAIESAPK VNEVLLNTLI SNLPWADKEI FNKLLNLYQE KNVTKSIVSH RIILKQSKQI
EYTNEEILQL WNELLGKLDE AGYTYIANAD WSALRASTMF SGKFSYQRTG LYLSVLGKYK
DYMQNNFAAI QFLRNWVRDA NAYRLISKIT LEENPQFDGA IKVDIPEFDS LRPNINYREV
TKQVTDADPR LLE