RMLC_STRGR
ID RMLC_STRGR Reviewed; 200 AA.
AC P29783;
DT 01-APR-1993, integrated into UniProtKB/Swiss-Prot.
DT 01-APR-1993, sequence version 1.
DT 03-AUG-2022, entry version 82.
DE RecName: Full=dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000250|UniProtKB:P9WH11};
DE EC=5.1.3.13 {ECO:0000250|UniProtKB:P9WH11};
DE AltName: Full=Thymidine diphospho-4-keto-rhamnose 3,5-epimerase {ECO:0000250|UniProtKB:P9WH11};
DE AltName: Full=dTDP-4-keto-6-deoxyglucose 3,5-epimerase {ECO:0000303|PubMed:1661369};
DE AltName: Full=dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase {ECO:0000250|UniProtKB:P9WH11};
DE AltName: Full=dTDP-L-rhamnose synthase {ECO:0000250|UniProtKB:P9WH11};
GN Name=strM {ECO:0000303|PubMed:1661369};
OS Streptomyces griseus.
OC Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae;
OC Streptomyces.
OX NCBI_TaxID=1911;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], FUNCTION IN BIOSYNTHESIS OF THE
RP STREPTOSE MOIETY OF STREPTOMYCIN, AND PATHWAY.
RC STRAIN=N2-3-11;
RX PubMed=1661369; DOI=10.1007/bf00293829;
RA Pissowotzki K., Mansouri K., Piepersberg W.;
RT "Genetics of streptomycin production in Streptomyces griseus: molecular
RT structure and putative function of genes strELMB2N.";
RL Mol. Gen. Genet. 231:113-123(1991).
CC -!- FUNCTION: Involved in the biosynthesis of the dihydrostreptose moiety
CC of streptomycin (PubMed:1661369). Catalyzes the epimerization of the
CC C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-
CC deoxy-L-lyxo-4-hexulose (By similarity). {ECO:0000250|UniProtKB:P9WH11,
CC ECO:0000269|PubMed:1661369}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=dTDP-4-dehydro-6-deoxy-alpha-D-glucose = dTDP-4-dehydro-beta-
CC L-rhamnose; Xref=Rhea:RHEA:16969, ChEBI:CHEBI:57649,
CC ChEBI:CHEBI:62830; EC=5.1.3.13;
CC Evidence={ECO:0000250|UniProtKB:P9WH11};
CC -!- PATHWAY: Carbohydrate biosynthesis; dTDP-L-rhamnose biosynthesis.
CC {ECO:0000250|UniProtKB:P26394}.
CC -!- PATHWAY: Antibiotic biosynthesis; streptomycin biosynthesis.
CC {ECO:0000305|PubMed:1661369}.
CC -!- SIMILARITY: Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
CC {ECO:0000305}.
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DR EMBL; X62567; CAA44442.1; -; Genomic_DNA.
DR PIR; S18619; XUSMEG.
DR RefSeq; WP_003970234.1; NZ_UAVD01000010.1.
DR AlphaFoldDB; P29783; -.
DR SMR; P29783; -.
DR GeneID; 6214583; -.
DR OMA; RGVFLEW; -.
DR UniPathway; UPA00066; -.
DR UniPathway; UPA00124; -.
DR GO; GO:0008830; F:dTDP-4-dehydrorhamnose 3,5-epimerase activity; IEA:UniProtKB-EC.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:UniProtKB-KW.
DR GO; GO:0019305; P:dTDP-rhamnose biosynthetic process; IEA:UniProtKB-UniPathway.
DR GO; GO:0019872; P:streptomycin biosynthetic process; IEA:UniProtKB-UniPathway.
DR Gene3D; 2.60.120.10; -; 1.
DR InterPro; IPR000888; dTDP_sugar_isom.
DR InterPro; IPR014710; RmlC-like_jellyroll.
DR InterPro; IPR011051; RmlC_Cupin_sf.
DR PANTHER; PTHR21047; PTHR21047; 1.
DR Pfam; PF00908; dTDP_sugar_isom; 1.
DR SUPFAM; SSF51182; SSF51182; 1.
PE 1: Evidence at protein level;
KW Antibiotic biosynthesis; Carbohydrate metabolism; Isomerase;
KW Streptomycin biosynthesis.
FT CHAIN 1..200
FT /note="dTDP-4-dehydrorhamnose 3,5-epimerase"
FT /id="PRO_0000207983"
FT ACT_SITE 60
FT /note="Proton acceptor"
FT /evidence="ECO:0000250|UniProtKB:Q9HU21"
FT ACT_SITE 129
FT /note="Proton donor"
FT /evidence="ECO:0000250|UniProtKB:Q9HU21"
FT BINDING 21
FT /ligand="substrate"
FT /evidence="ECO:0000250|UniProtKB:Q9HU21"
FT BINDING 26
FT /ligand="substrate"
FT /evidence="ECO:0000250|UniProtKB:Q9HU21"
FT BINDING 45..47
FT /ligand="substrate"
FT /evidence="ECO:0000250|UniProtKB:Q9HU21"
FT BINDING 57
FT /ligand="substrate"
FT /evidence="ECO:0000250|UniProtKB:Q9HU21"
FT BINDING 70
FT /ligand="substrate"
FT /evidence="ECO:0000250|UniProtKB:Q9HU21"
FT BINDING 116
FT /ligand="substrate"
FT /evidence="ECO:0000250|UniProtKB:Q9HU21"
FT BINDING 140
FT /ligand="substrate"
FT /evidence="ECO:0000250|UniProtKB:Q9HU21"
FT BINDING 165
FT /ligand="substrate"
FT /evidence="ECO:0000250|UniProtKB:Q9HU21"
FT SITE 135
FT /note="Participates in a stacking interaction with the
FT thymidine ring of dTDP-4-oxo-6-deoxyglucose"
FT /evidence="ECO:0000250|UniProtKB:Q5SFD1"
SQ SEQUENCE 200 AA; 21956 MW; DB63F5BFC218932E CRC64;
MRPLSVQGAW LSETRAFADD RGEFQELYSA RSLRGALGYD PGVAQVNRSV SRRGVLRGVH
FAQLPPSQAK YVTCLSGAVL DVVVDIRTGS PTYRAWEAVR LDDPHRSLYV EAGLGHSFMA
LTDDAVVVYL TSQGYAAGRE HGVHPLDPDL GIAWPDGIEP VLSEKDRQAP GIAEMERRGL
LPDYEECLAF RRSLCERGTG