RN121_CAEEL
ID RN121_CAEEL Reviewed; 409 AA.
AC Q09251;
DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1997, sequence version 1.
DT 03-AUG-2022, entry version 139.
DE RecName: Full=RING finger protein 121;
GN Name=rnf-121; ORFNames=C16C10.5;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
RN [2]
RP FUNCTION.
RX PubMed=22285439; DOI=10.1016/j.mod.2012.01.003;
RA Kovacevic I., Ho R., Cram E.J.;
RT "CCDC-55 is required for larval development and distal tip cell migration
RT in Caenorhabditis elegans.";
RL Mech. Dev. 128:548-559(2012).
CC -!- FUNCTION: Required for the cessation of distal tip cell migration at
CC the end of larval morphogenesis. {ECO:0000269|PubMed:22285439}.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the RNF121 family. {ECO:0000305}.
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DR EMBL; Z46787; CAA86743.1; -; Genomic_DNA.
DR PIR; T19326; T19326.
DR RefSeq; NP_497832.2; NM_065431.5.
DR AlphaFoldDB; Q09251; -.
DR BioGRID; 47529; 2.
DR STRING; 6239.C16C10.5; -.
DR EPD; Q09251; -.
DR PaxDb; Q09251; -.
DR PeptideAtlas; Q09251; -.
DR EnsemblMetazoa; C16C10.5.1; C16C10.5.1; WBGene00007626.
DR GeneID; 182681; -.
DR KEGG; cel:CELE_C16C10.5; -.
DR CTD; 182681; -.
DR WormBase; C16C10.5; CE49432; WBGene00007626; rnf-121.
DR eggNOG; KOG1734; Eukaryota.
DR GeneTree; ENSGT00390000013075; -.
DR HOGENOM; CLU_055016_1_0_1; -.
DR InParanoid; Q09251; -.
DR OrthoDB; 1167893at2759; -.
DR PhylomeDB; Q09251; -.
DR PRO; PR:Q09251; -.
DR Proteomes; UP000001940; Chromosome III.
DR Bgee; WBGene00007626; Expressed in pharyngeal muscle cell (C elegans) and 4 other tissues.
DR GO; GO:0005789; C:endoplasmic reticulum membrane; IDA:WormBase.
DR GO; GO:0000139; C:Golgi membrane; IDA:WormBase.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0033017; C:sarcoplasmic reticulum membrane; IDA:WormBase.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0061630; F:ubiquitin protein ligase activity; IDA:WormBase.
DR GO; GO:0040039; P:inductive cell migration; IMP:WormBase.
DR GO; GO:0030433; P:ubiquitin-dependent ERAD pathway; IMP:WormBase.
DR Gene3D; 3.30.40.10; -; 1.
DR InterPro; IPR040176; RNF121/RNF175.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR13407; PTHR13407; 1.
DR Pfam; PF13639; zf-RING_2; 1.
DR SMART; SM00184; RING; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 3: Inferred from homology;
KW Membrane; Metal-binding; Reference proteome; Transmembrane;
KW Transmembrane helix; Zinc; Zinc-finger.
FT CHAIN 1..409
FT /note="RING finger protein 121"
FT /id="PRO_0000056322"
FT TRANSMEM 122..142
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 147..167
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 174..194
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 218..238
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 243..263
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 388..408
FT /note="Helical"
FT /evidence="ECO:0000255"
FT ZN_FING 296..358
FT /note="RING-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00175"
SQ SEQUENCE 409 AA; 47627 MW; 6AB33FC9D026C461 CRC64;
MTFSYFISIF TANLSPTFPC RKVNQLNYFY QLLNLKCFFR SIFKIGHFPR GSPLYLLEKS
ITFSKIISIF SGHRMGQHGA IRLQNEVQEG MPPPHELTEE EQWAEEHRKM HEKHKGHEAM
HMEMMVIFMI SVIVGQIFLV TWKRKHFKSY QMCTLIGMLT IPVYVCFNRS WYRFLATWLV
FCIFSAFIWL KASAQHISGG TPRFVYKWFL FLHKLSYVLG VVGYLIMMGA LLGFHVLFGV
SQPTLMDAGI LFMFYGVYYG VLGRDFAHIC TARMASRIGY YTPEGLPKKH LEDGVCAVCG
GRLDDSEHVH DADAVVTTKM VEDEDEKLYK LSCGHVFHEF CIRGWVVVGK LQTCPYCKER
VDLQRMFKNP WEKPHLFYGK LLDWIRYLVC WQPLIVTAVQ GLTTWMGLE