RNA14_USTMA
ID RNA14_USTMA Reviewed; 945 AA.
AC Q4PCV8; A0A0D1E0Y0;
DT 30-MAY-2006, integrated into UniProtKB/Swiss-Prot.
DT 19-JUL-2005, sequence version 1.
DT 25-MAY-2022, entry version 90.
DE RecName: Full=mRNA 3'-end-processing protein RNA14;
GN Name=RNA14; ORFNames=UMAG_02055;
OS Ustilago maydis (strain 521 / FGSC 9021) (Corn smut fungus).
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina;
OC Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago.
OX NCBI_TaxID=237631;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=521 / FGSC 9021;
RX PubMed=17080091; DOI=10.1038/nature05248;
RA Kaemper J., Kahmann R., Boelker M., Ma L.-J., Brefort T., Saville B.J.,
RA Banuett F., Kronstad J.W., Gold S.E., Mueller O., Perlin M.H.,
RA Woesten H.A.B., de Vries R., Ruiz-Herrera J., Reynaga-Pena C.G.,
RA Snetselaar K., McCann M., Perez-Martin J., Feldbruegge M., Basse C.W.,
RA Steinberg G., Ibeas J.I., Holloman W., Guzman P., Farman M.L.,
RA Stajich J.E., Sentandreu R., Gonzalez-Prieto J.M., Kennell J.C., Molina L.,
RA Schirawski J., Mendoza-Mendoza A., Greilinger D., Muench K., Roessel N.,
RA Scherer M., Vranes M., Ladendorf O., Vincon V., Fuchs U., Sandrock B.,
RA Meng S., Ho E.C.H., Cahill M.J., Boyce K.J., Klose J., Klosterman S.J.,
RA Deelstra H.J., Ortiz-Castellanos L., Li W., Sanchez-Alonso P.,
RA Schreier P.H., Haeuser-Hahn I., Vaupel M., Koopmann E., Friedrich G.,
RA Voss H., Schlueter T., Margolis J., Platt D., Swimmer C., Gnirke A.,
RA Chen F., Vysotskaia V., Mannhaupt G., Gueldener U., Muensterkoetter M.,
RA Haase D., Oesterheld M., Mewes H.-W., Mauceli E.W., DeCaprio D., Wade C.M.,
RA Butler J., Young S.K., Jaffe D.B., Calvo S.E., Nusbaum C., Galagan J.E.,
RA Birren B.W.;
RT "Insights from the genome of the biotrophic fungal plant pathogen Ustilago
RT maydis.";
RL Nature 444:97-101(2006).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=521 / FGSC 9021;
RA Gueldener U., Muensterkoetter M., Walter M.C., Mannhaupt G., Kahmann R.;
RL Submitted (SEP-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Component of the cleavage factor IA (CFIA) complex, which is
CC involved in the endonucleolytic cleavage during polyadenylation-
CC dependent pre-mRNA 3'-end formation. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}. Cytoplasm {ECO:0000250}.
CC Note=Nucleus and/or cytoplasm. {ECO:0000250}.
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DR EMBL; CM003144; KIS69516.1; -; Genomic_DNA.
DR RefSeq; XP_011388436.1; XM_011390134.1.
DR AlphaFoldDB; Q4PCV8; -.
DR SMR; Q4PCV8; -.
DR STRING; 5270.UM02055P0; -.
DR EnsemblFungi; KIS69516; KIS69516; UMAG_02055.
DR GeneID; 23562895; -.
DR KEGG; uma:UMAG_02055; -.
DR VEuPathDB; FungiDB:UMAG_02055; -.
DR eggNOG; KOG1914; Eukaryota.
DR HOGENOM; CLU_007630_0_0_1; -.
DR InParanoid; Q4PCV8; -.
DR OMA; WSVYLDY; -.
DR OrthoDB; 331411at2759; -.
DR Proteomes; UP000000561; Chromosome 5.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0031124; P:mRNA 3'-end processing; IEA:InterPro.
DR GO; GO:0031123; P:RNA 3'-end processing; IBA:GO_Central.
DR InterPro; IPR003107; HAT.
DR InterPro; IPR045243; Rna14-like.
DR InterPro; IPR008847; Suf.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR PANTHER; PTHR19980; PTHR19980; 1.
DR Pfam; PF05843; Suf; 1.
DR SMART; SM00386; HAT; 9.
DR SUPFAM; SSF48452; SSF48452; 2.
PE 3: Inferred from homology;
KW Cytoplasm; mRNA processing; Nucleus; Reference proteome; Repeat.
FT CHAIN 1..945
FT /note="mRNA 3'-end-processing protein RNA14"
FT /id="PRO_0000238529"
FT REPEAT 172..204
FT /note="HAT 1"
FT REPEAT 206..238
FT /note="HAT 2"
FT REPEAT 240..271
FT /note="HAT 3"
FT REPEAT 289..324
FT /note="HAT 4"
FT REPEAT 335..368
FT /note="HAT 5"
FT REPEAT 416..448
FT /note="HAT 6"
FT REPEAT 458..490
FT /note="HAT 7"
FT REPEAT 602..635
FT /note="HAT 8"
FT REPEAT 672..704
FT /note="HAT 9"
FT REPEAT 706..740
FT /note="HAT 10"
FT REGION 1..24
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 36..171
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 568..590
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 801..868
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 42..88
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 119..170
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 802..828
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 945 AA; 104799 MW; 0AE62658DEDB0E0D CRC64;
MSAEASEAHE AQVKMEVSAD QESEIAAVQQ IASVGVSADA DADADADADA DADADADADA
DADADADADL DADADADADA DADADAEADV DHDDKPDAEG DVEVQTDSIA ADVKAASENE
PAQSANAKMD ESQATPQPMA ESKLDDHQQQ DSQLVSPQAG SSNQPPQPHK YMTVEQRKQL
FEERIRIDPR DGEAWLNLIE EAQSREDMAA TRALYDRFFK VFPNQARQWL AYLDLELAHS
NFAQVEAIFN QCLRTTPSVD LWKFYLSYTR RVNPLAPSTG AEEDPAREQT RRVLEGAYEF
ALRFIGNDKD SGSIWTDYIL LIKEREARGG WKEGQKMDDL RRVYQRAVSV PLTNIETIWK
DYDAYENGLN KLTAKKFLAE RSPAYMTARR VLRDLKAYSD PLVKPLLPRV PVWTTSALAG
DAAQDPAQWQ RERQQADAWI EYLKWEESNP LLLEDVAILQ ARVTSAYRRA TMYLRFYPEV
WYLASRYLVS ILRVDEAATW LKNGMEACPG SFLLHFAYAE LGEARKSTSD CAAVFDGLLD
HVHAQIDARQ AKLQQDLKTV DLEADRTKAQ AATRRANEGD GDVDVDGEER ERERKAGELL
QIRKQELQAA AKPEIEGLKE ASALVWIKYM HFLRRTEGIR PARSVFSRAR KSPHCTWQVF
EASALMEYHC SKDAVVATKV FELALKTFGS DEAFVVRYLD FLISMNDDSN ARALFERVIG
TFAPERARPI WERWAKYEYN FGDSVAIQKL ESRLAETYPD EPATKRFIAR SSYMDLDLVG
PRDLGIRAAM AGASAADRAV EAAKDGGAEE GPRRKTMQEM KRLAAESAQD DTSGDWARPG
ASSSAGGAGG PPVKKFKRDS ASPAPAAFNN QAVGQQVAGP RDAWNEFPES VLVFMEMLPS
AQLFDGPMFK PEDIIDCIRS ANVPVGGGAR RGAAGYGGAG RGRYR
