RNA14_YARLI
ID RNA14_YARLI Reviewed; 806 AA.
AC Q6C8L8;
DT 30-MAY-2006, integrated into UniProtKB/Swiss-Prot.
DT 16-AUG-2004, sequence version 1.
DT 03-AUG-2022, entry version 92.
DE RecName: Full=mRNA 3'-end-processing protein RNA14;
GN Name=RNA14; OrderedLocusNames=YALI0D18612g;
OS Yarrowia lipolytica (strain CLIB 122 / E 150) (Yeast) (Candida lipolytica).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Dipodascaceae; Yarrowia.
OX NCBI_TaxID=284591;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CLIB 122 / E 150;
RX PubMed=15229592; DOI=10.1038/nature02579;
RA Dujon B., Sherman D., Fischer G., Durrens P., Casaregola S., Lafontaine I.,
RA de Montigny J., Marck C., Neuveglise C., Talla E., Goffard N., Frangeul L.,
RA Aigle M., Anthouard V., Babour A., Barbe V., Barnay S., Blanchin S.,
RA Beckerich J.-M., Beyne E., Bleykasten C., Boisrame A., Boyer J.,
RA Cattolico L., Confanioleri F., de Daruvar A., Despons L., Fabre E.,
RA Fairhead C., Ferry-Dumazet H., Groppi A., Hantraye F., Hennequin C.,
RA Jauniaux N., Joyet P., Kachouri R., Kerrest A., Koszul R., Lemaire M.,
RA Lesur I., Ma L., Muller H., Nicaud J.-M., Nikolski M., Oztas S.,
RA Ozier-Kalogeropoulos O., Pellenz S., Potier S., Richard G.-F.,
RA Straub M.-L., Suleau A., Swennen D., Tekaia F., Wesolowski-Louvel M.,
RA Westhof E., Wirth B., Zeniou-Meyer M., Zivanovic Y., Bolotin-Fukuhara M.,
RA Thierry A., Bouchier C., Caudron B., Scarpelli C., Gaillardin C.,
RA Weissenbach J., Wincker P., Souciet J.-L.;
RT "Genome evolution in yeasts.";
RL Nature 430:35-44(2004).
CC -!- FUNCTION: Component of the cleavage factor IA (CFIA) complex, which is
CC involved in the endonucleolytic cleavage during polyadenylation-
CC dependent pre-mRNA 3'-end formation. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}. Cytoplasm {ECO:0000250}.
CC Note=Nucleus and/or cytoplasm. {ECO:0000250}.
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DR EMBL; CR382130; CAG81186.1; -; Genomic_DNA.
DR RefSeq; XP_502994.1; XM_502994.1.
DR AlphaFoldDB; Q6C8L8; -.
DR SMR; Q6C8L8; -.
DR STRING; 4952.CAG81186; -.
DR EnsemblFungi; CAG81186; CAG81186; YALI0_D18612g.
DR GeneID; 2911125; -.
DR KEGG; yli:YALI0D18612g; -.
DR VEuPathDB; FungiDB:YALI0_D18612g; -.
DR HOGENOM; CLU_007630_0_1_1; -.
DR InParanoid; Q6C8L8; -.
DR OMA; PKRQYFK; -.
DR Proteomes; UP000001300; Chromosome D.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0032991; C:protein-containing complex; IEA:UniProt.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0031124; P:mRNA 3'-end processing; IEA:InterPro.
DR GO; GO:0031123; P:RNA 3'-end processing; IBA:GO_Central.
DR InterPro; IPR003107; HAT.
DR InterPro; IPR045243; Rna14-like.
DR InterPro; IPR008847; Suf.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR PANTHER; PTHR19980; PTHR19980; 1.
DR Pfam; PF05843; Suf; 1.
DR SMART; SM00386; HAT; 7.
DR SUPFAM; SSF48452; SSF48452; 1.
PE 3: Inferred from homology;
KW Cytoplasm; mRNA processing; Nucleus; Reference proteome; Repeat.
FT CHAIN 1..806
FT /note="mRNA 3'-end-processing protein RNA14"
FT /id="PRO_0000238530"
FT REPEAT 221..253
FT /note="HAT 1"
FT REPEAT 255..286
FT /note="HAT 2"
FT REPEAT 299..334
FT /note="HAT 3"
FT REPEAT 345..378
FT /note="HAT 4"
FT REPEAT 404..440
FT /note="HAT 5"
FT REGION 1..187
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 729..770
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 62..110
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 147..183
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 729..756
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 806 AA; 90675 MW; 40FB5EC354832048 CRC64;
MSDDYDPTAV AFKPGDMETD MNTGEPLALE AEAAAKDPAH NEESGEDTNA NVESGTLVHQ
GDEPESIDKE DKVEDGPDTK SDGGVLDEPK DGEQRDDEKK EEHKPENPSE EVAEDDDYVP
AAVSEPVEED SAGGGSVGGT GIPDGAISSL AASTTIPPPS DPNQVGGGAS STSNNNNSGP
DNNKRKRLAT DTIGILEDRI AANPRDMPAW LDLISTIVRK EKLDESRDIY ERFLALYPLS
AEIWIEYITL EMDNGEFKRL EQLFGRCLTR LPNLKLWNIY LTYVRRVNVL SSESDKITEA
RTNIIKAFEF YLDHVGIDRE SGNVWFEYLD FIKSKPATTT WEEQQKNDLT RKIYRKAIGI
PLNNLSILWT AYTNFEYSLN KATARKFINE KSGSCQNARQ CQTVLENLMR GLDRSSVPKS
GPRDEFQVRA WKKWIDWEKS NPLGTDNKAE TNKRLLYCLK QAVMSLQFVP EIWFLAAEYC
FDDPLLKTEA LQFLKDGLSL NPNSSLLAFR LAEYYEREAD AEKMRTIYDE HIESLGKERQ
ALIEAQGDPE AEPTAEIIKL NTQISIAYSV CMKAVKRFEG IKPGRMVFKK ARNTGFATYH
IYVASALMEF HHNKNPTVAT NVFELGLKYC GSNAAYVQHY LDFLISLHDD TNARALFEKT
IPLLGPSDAA SLIKSMIKFE SDFGEITSVV KLQDRLRQLN PDTSPITIIA DRFATSDFDV
IRQCDMLQKP KSRTDEDSDS ERPSKRARRT SHGNDQGDKM EPFNLPQKID ALLRQLPNSS
DYGEATFDPQ RLVDLFRDVR IPDGLL