RNP3_METMP
ID RNP3_METMP Reviewed; 232 AA.
AC P60781;
DT 13-APR-2004, integrated into UniProtKB/Swiss-Prot.
DT 13-APR-2004, sequence version 1.
DT 03-AUG-2022, entry version 86.
DE RecName: Full=Ribonuclease P protein component 3 {ECO:0000255|HAMAP-Rule:MF_00756};
DE Short=RNase P component 3 {ECO:0000255|HAMAP-Rule:MF_00756};
DE EC=3.1.26.5 {ECO:0000255|HAMAP-Rule:MF_00756};
DE AltName: Full=Rpp30 {ECO:0000255|HAMAP-Rule:MF_00756};
GN Name=rnp3 {ECO:0000255|HAMAP-Rule:MF_00756}; OrderedLocusNames=MMP0430;
OS Methanococcus maripaludis (strain S2 / LL).
OC Archaea; Euryarchaeota; Methanomada group; Methanococci; Methanococcales;
OC Methanococcaceae; Methanococcus.
OX NCBI_TaxID=267377;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S2 / LL;
RX PubMed=15466049; DOI=10.1128/jb.186.20.6956-6969.2004;
RA Hendrickson E.L., Kaul R., Zhou Y., Bovee D., Chapman P., Chung J.,
RA Conway de Macario E., Dodsworth J.A., Gillett W., Graham D.E., Hackett M.,
RA Haydock A.K., Kang A., Land M.L., Levy R., Lie T.J., Major T.A.,
RA Moore B.C., Porat I., Palmeiri A., Rouse G., Saenphimmachak C., Soell D.,
RA Van Dien S., Wang T., Whitman W.B., Xia Q., Zhang Y., Larimer F.W.,
RA Olson M.V., Leigh J.A.;
RT "Complete genome sequence of the genetically tractable hydrogenotrophic
RT methanogen Methanococcus maripaludis.";
RL J. Bacteriol. 186:6956-6969(2004).
RN [2]
RP FUNCTION, BIOPHYSICOCHEMICAL PROPERTIES, SUBUNIT, AND SUBCELLULAR LOCATION.
RC STRAIN=S2 / LL;
RX PubMed=20675586; DOI=10.1073/pnas.1005556107;
RA Cho I.M., Lai L.B., Susanti D., Mukhopadhyay B., Gopalan V.;
RT "Ribosomal protein L7Ae is a subunit of archaeal RNase P.";
RL Proc. Natl. Acad. Sci. U.S.A. 107:14573-14578(2010).
CC -!- FUNCTION: Part of ribonuclease P, a protein complex that generates
CC mature tRNA molecules by cleaving their 5'-ends. {ECO:0000255|HAMAP-
CC Rule:MF_00756, ECO:0000269|PubMed:20675586}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Endonucleolytic cleavage of RNA, removing 5'-extranucleotides
CC from tRNA precursor.; EC=3.1.26.5; Evidence={ECO:0000255|HAMAP-
CC Rule:MF_00756};
CC -!- BIOPHYSICOCHEMICAL PROPERTIES:
CC Kinetic parameters:
CC KM=2.6 uM for pre-tRNA-Tyr in the absence of L7Ae
CC {ECO:0000269|PubMed:20675586};
CC KM=0.044 uM for pre-tRNA-Tyr in the presence of L7Ae
CC {ECO:0000269|PubMed:20675586};
CC Note=kcat 10 min(-1) in absence of L7Ae, 63 min(-1) in presence of
CC L7Ae. Kinetic parameters determined at 37 degrees Celsius.;
CC Temperature dependence:
CC Optimum temperature is 36-38 degrees Celsius in the absence of L7Ae,
CC 48-50 degrees Celsius in presence of L7Ae.
CC {ECO:0000269|PubMed:20675586};
CC -!- SUBUNIT: Consists of a catalytic RNA component and at least 5 protein
CC subunits. {ECO:0000269|PubMed:20675586}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00756,
CC ECO:0000269|PubMed:20675586}.
CC -!- SIMILARITY: Belongs to the eukaryotic/archaeal RNase P protein
CC component 3 family. {ECO:0000255|HAMAP-Rule:MF_00756}.
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DR EMBL; BX950229; CAF29986.1; -; Genomic_DNA.
DR RefSeq; WP_011170374.1; NC_005791.1.
DR AlphaFoldDB; P60781; -.
DR SMR; P60781; -.
DR DIP; DIP-59366N; -.
DR IntAct; P60781; 2.
DR STRING; 267377.MMP0430; -.
DR PRIDE; P60781; -.
DR DNASU; 2762077; -.
DR EnsemblBacteria; CAF29986; CAF29986; MMP0430.
DR GeneID; 2762077; -.
DR KEGG; mmp:MMP0430; -.
DR PATRIC; fig|267377.15.peg.434; -.
DR eggNOG; arCOG00307; Archaea.
DR HOGENOM; CLU_074509_0_0_2; -.
DR OMA; INRAACE; -.
DR OrthoDB; 66325at2157; -.
DR BioCyc; MMAR267377:MMP_RS02285-MON; -.
DR BRENDA; 3.1.26.5; 3262.
DR Proteomes; UP000000590; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IDA:UniProtKB.
DR GO; GO:0030677; C:ribonuclease P complex; IDA:UniProtKB.
DR GO; GO:0004526; F:ribonuclease P activity; IDA:UniProtKB.
DR GO; GO:0001682; P:tRNA 5'-leader removal; IDA:UniProtKB.
DR HAMAP; MF_00756; RNase_P_3; 1.
DR InterPro; IPR016195; Pol/histidinol_Pase-like.
DR InterPro; IPR023539; RNase_P_comp-3_arc.
DR InterPro; IPR002738; RNase_P_p30.
DR Pfam; PF01876; RNase_P_p30; 1.
DR SUPFAM; SSF89550; SSF89550; 1.
PE 1: Evidence at protein level;
KW Cytoplasm; Endonuclease; Hydrolase; Nuclease; Reference proteome;
KW tRNA processing.
FT CHAIN 1..232
FT /note="Ribonuclease P protein component 3"
FT /id="PRO_0000140042"
SQ SEQUENCE 232 AA; 26452 MW; 1BE3FFFB9096C7EA CRC64;
MLEGIFDINH VFDEEGIKTL KRFGWDGSVA VQNHNEYSEE KINTAVEYGE NCEFKVYSGV
KISTKNQNEM EKAVKKYRNK VDILLVEGGD VKINRRVLEM NDVDILSTPE LNRMDNGLDH
ILARLGSTNR VAVELNFGNL LKSKNYDRSK ILWAFQRNLK LSKKYDTPVV ISSGANDIYG
IKAPGDLRGF LNTVADPLYS KKIIETTSKI IDYRLYLKNK NVLMPGLEIV EE