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RP07_VACCA
ID   RP07_VACCA              Reviewed;          63 AA.
AC   P68314; Q76ZU0; Q89560;
DT   09-NOV-2004, integrated into UniProtKB/Swiss-Prot.
DT   09-NOV-2004, sequence version 1.
DT   03-AUG-2022, entry version 59.
DE   RecName: Full=DNA-directed RNA polymerase 7 kDa subunit;
DE            EC=2.7.7.6;
GN   Name=RPO7; OrderedLocusNames=MVA075R, ACAM3000_MVA_075; ORFNames=G5.5R;
OS   Vaccinia virus (strain Ankara) (VACV).
OC   Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes;
OC   Chitovirales; Poxviridae; Chordopoxvirinae; Orthopoxvirus; Vaccinia virus.
OX   NCBI_TaxID=126794;
OH   NCBI_TaxID=9606; Homo sapiens (Human).
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=9601507; DOI=10.1006/viro.1998.9123;
RA   Antoine G., Scheiflinger F., Dorner F., Falkner F.G.;
RT   "The complete genomic sequence of the modified vaccinia Ankara strain:
RT   comparison with other orthopoxviruses.";
RL   Virology 244:365-396(1998).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Isolate Acambis 3000;
RA   Esposito J.J., Frace M., Sammons S.A., Olsen-Rasmussen M.S., Osborne J.,
RA   Khristova M., Wohlhueter R.M.;
RL   Submitted (APR-2004) to the EMBL/GenBank/DDBJ databases.
RN   [3]
RP   REVIEW.
RX   PubMed=12917449; DOI=10.1099/vir.0.18942-0;
RA   Broyles S.S.;
RT   "Vaccinia virus transcription.";
RL   J. Gen. Virol. 84:2293-2303(2003).
CC   -!- FUNCTION: Part of the DNA-dependent RNA polymerase which catalyzes the
CC       transcription of viral DNA into RNA using the four ribonucleoside
CC       triphosphates as substrates. Responsible for the transcription of
CC       early, intermediate and late genes. DNA-dependent RNA polymerase
CC       associates with the early transcription factor (ETF), itself composed
CC       of D6 and A7, thereby allowing the early genes transcription. Late
CC       transcription, and probably also intermediate transcription, require
CC       newly synthesized RNA polymerase.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC         RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC         COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC         EC=2.7.7.6;
CC   -!- SUBUNIT: The DNA-dependent RNA polymerase used for intermediate and
CC       late genes expression consists of eight subunits 147 kDa, 133 kDa, 35
CC       kDa, 30 kDa, 22 kDa, 19 kDa, 18 kDa and 7 kDa totalling more than 500
CC       kDa in mass. The same holoenzyme, with the addition of the
CC       transcription-specificity factor RAP94, is used for early gene
CC       expression (By similarity). {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}. Note=All the enzymes and
CC       other proteins required to synthesize early mRNAs are packaged within
CC       the virion core along with the DNA genome. This is necessary because
CC       viral early mRNAs are synthesized within minutes after virus entry into
CC       the cell and are extruded through pores in the core particle.
CC   -!- INDUCTION: Expressed in the early phase of the viral replicative cycle.
CC   -!- SIMILARITY: Belongs to the poxviridae DNA-directed RNA polymerase 7 kDa
CC       subunit family. {ECO:0000305}.
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DR   EMBL; U94848; AAB96494.1; -; Genomic_DNA.
DR   EMBL; AY603355; AAT10473.1; -; Genomic_DNA.
DR   PIR; T37351; T37351.
DR   RefSeq; YP_232965.1; NC_006998.1.
DR   PDB; 6RIE; EM; 3.10 A; J=1-63.
DR   PDBsum; 6RIE; -.
DR   SMR; P68314; -.
DR   DNASU; 3707539; -.
DR   GeneID; 3707539; -.
DR   KEGG; vg:3707539; -.
DR   Proteomes; UP000159908; Genome.
DR   Proteomes; UP000172909; Genome.
DR   GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:InterPro.
DR   InterPro; IPR008448; RNA_pol_7kDa_chordopoxvir.
DR   Pfam; PF05864; Chordopox_RPO7; 1.
PE   1: Evidence at protein level;
KW   3D-structure; DNA-directed RNA polymerase; Early protein;
KW   Nucleotidyltransferase; Transcription; Transferase; Virion.
FT   CHAIN           1..63
FT                   /note="DNA-directed RNA polymerase 7 kDa subunit"
FT                   /id="PRO_0000099155"
FT   TURN            8..10
FT                   /evidence="ECO:0007829|PDB:6RIE"
FT   HELIX           15..22
FT                   /evidence="ECO:0007829|PDB:6RIE"
FT   HELIX           28..31
FT                   /evidence="ECO:0007829|PDB:6RIE"
FT   HELIX           38..46
FT                   /evidence="ECO:0007829|PDB:6RIE"
FT   STRAND          59..61
FT                   /evidence="ECO:0007829|PDB:6RIE"
SQ   SEQUENCE   63 AA;  7288 MW;  D127087A887A47DA CRC64;
     MVFQLVCSTC GKDISHERYK LIIRKKSLKD VLVSVKNECC RLKLSTQIEP QRNLTVQPLL
     DIN
 
 
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