RP132_VACCA
ID RP132_VACCA Reviewed; 1156 AA.
AC O57230;
DT 07-DEC-2004, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-1998, sequence version 1.
DT 03-AUG-2022, entry version 88.
DE RecName: Full=DNA-directed RNA polymerase 133 kDa polypeptide;
DE EC=2.7.7.6;
GN Name=RPO132; OrderedLocusNames=MVA135R, ACAM3000_MVA_135;
OS Vaccinia virus (strain Ankara) (VACV).
OC Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes;
OC Chitovirales; Poxviridae; Chordopoxvirinae; Orthopoxvirus; Vaccinia virus.
OX NCBI_TaxID=126794;
OH NCBI_TaxID=9606; Homo sapiens (Human).
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=9601507; DOI=10.1006/viro.1998.9123;
RA Antoine G., Scheiflinger F., Dorner F., Falkner F.G.;
RT "The complete genomic sequence of the modified vaccinia Ankara strain:
RT comparison with other orthopoxviruses.";
RL Virology 244:365-396(1998).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Isolate Acambis 3000;
RA Esposito J.J., Frace M., Sammons S.A., Olsen-Rasmussen M.S., Osborne J.,
RA Khristova M., Wohlhueter R.M.;
RL Submitted (APR-2004) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP REVIEW.
RX PubMed=12917449; DOI=10.1099/vir.0.18942-0;
RA Broyles S.S.;
RT "Vaccinia virus transcription.";
RL J. Gen. Virol. 84:2293-2303(2003).
CC -!- FUNCTION: Part of the DNA-dependent RNA polymerase which catalyzes the
CC transcription of viral DNA into RNA using the four ribonucleoside
CC triphosphates as substrates. Responsible for the transcription of
CC early, intermediate and late genes. DNA-dependent RNA polymerase
CC associates with the early transcription factor (ETF), itself composed
CC of D6 and A7, thereby allowing the early genes transcription. Late
CC transcription, and probably also intermediate transcription, require
CC newly synthesized RNA polymerase.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.6;
CC -!- SUBUNIT: The DNA-dependent RNA polymerase used for intermediate and
CC late genes expression consists of eight subunits 147 kDa, 133 kDa, 35
CC kDa, 30 kDa, 22 kDa, 19 kDa, 18 kDa and 7 kDa totalling more than 500
CC kDa in mass. The same holoenzyme, with the addition of the
CC transcription-specificity factor RAP94, is used for early gene
CC expression.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}. Note=All the enzymes and
CC other proteins required to synthesize early mRNAs are packaged within
CC the virion core along with the DNA genome. This is necessary because
CC viral early mRNAs are synthesized within minutes after virus entry into
CC the cell and are extruded through pores in the core particle.
CC -!- SIMILARITY: Belongs to the RNA polymerase beta chain family.
CC {ECO:0000305}.
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DR EMBL; U94848; AAB96526.1; -; Genomic_DNA.
DR EMBL; AY603355; AAT10534.1; -; Genomic_DNA.
DR PIR; T37411; T37411.
DR SMR; O57230; -.
DR Proteomes; UP000159908; Genome.
DR Proteomes; UP000172909; Genome.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0032549; F:ribonucleoside binding; IEA:InterPro.
DR GO; GO:0006351; P:transcription, DNA-templated; IEA:InterPro.
DR Gene3D; 2.40.270.10; -; 1.
DR Gene3D; 2.40.50.150; -; 1.
DR InterPro; IPR015712; DNA-dir_RNA_pol_su2.
DR InterPro; IPR007120; DNA-dir_RNAP_su2_dom.
DR InterPro; IPR037033; DNA-dir_RNAP_su2_hyb_sf.
DR InterPro; IPR024390; RNA_pol_132_poxvirus.
DR InterPro; IPR007121; RNA_pol_bsu_CS.
DR InterPro; IPR007645; RNA_pol_Rpb2_3.
DR InterPro; IPR007647; RNA_pol_Rpb2_5.
DR InterPro; IPR007641; RNA_pol_Rpb2_7.
DR InterPro; IPR014724; RNA_pol_RPB2_OB-fold.
DR PANTHER; PTHR20856; PTHR20856; 1.
DR Pfam; PF04565; RNA_pol_Rpb2_3; 1.
DR Pfam; PF04567; RNA_pol_Rpb2_5; 1.
DR Pfam; PF00562; RNA_pol_Rpb2_6; 1.
DR Pfam; PF04560; RNA_pol_Rpb2_7; 1.
DR Pfam; PF12415; rpo132; 1.
DR PROSITE; PS01166; RNA_POL_BETA; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase; Metal-binding; Nucleotidyltransferase;
KW Transcription; Transferase; Virion.
FT CHAIN 1..1156
FT /note="DNA-directed RNA polymerase 133 kDa polypeptide"
FT /id="PRO_0000048058"
SQ SEQUENCE 1156 AA; 132426 MW; F6657C8AF5E22EC3 CRC64;
MDQRLGYKFL VPDPKAGVFY RPLHFQYVSY SNFILHRLHE ILTVKRPLLS FKNNTERIMI
EISNVKVTPP DYSPIIASIK GKSYDALATF TVNIFKEVMT KEGISITKIS SYEGKDSHLI
KIPLLIGYGN KNPLDTAKYL VPNVIGGVFI NKQSVEKVGI NLVEKITTWP KFRVVKPNSF
TFSFSSVSPP NVLPTRYRHY KISLDISQLE ALNISSTKTF ITVNIVLLSQ YLSRVSLEFI
RRSLSYDMPP EVVYLVNAII DSAKRITESI TDFNIDTYIN DLVEAEHIKQ KSQLTINEFK
YEMLHNFLPH MNYTPDQLKG FYMISLLRKF LYCIYHTSRY PDRDSMVCHR ILTYGKYFET
LAHDELENYI GNIRNDIMNN HKNRGTYAVN IHVLTTPGLN HAFSSLLSGK FKKSDGSYRT
HPHYSWMQNI SIPRSVGFYP DQVKISKMFS VRKYHPSQYL YFCSSDVPER GPQVGLVSQL
SVLSSITNIL TSEYLDLEKK ICEYIRSYYK DDISYFETGF PITIENALVA SLNPNMICDF
VTDFRRRKRM GFFGNLEVGI TLVRDHMNEI RINIGAGRLV RPFLVVDNGE LMMDVCPELE
SRLDDMTFSD IQKEFPHVIE MVDIEQFTFS NVCESVQKFR MMSKDERKQY DLCDFPAEFR
DGYVASSLVG INHNSGPRAI LGCAQAKQAI SCLSSDIRNK IDNGIHLMYP ERPIVISKAL
ETSKIAANCF GQHVTIALMS YKGINQEDGI IIKKQFIQRG GLDIVTAKKH QVEIPLENFN
NKERDRSNAY SKLESNGLVR LNAFLESGDA IARNISSRTL EDDFARDNQI SFDVSEKYTD
MYKSRVERVQ VELTDKVKVR VLTMKERRPI LGDKFTTRTS QKGTVAYIAD ETELPYDENG
ITPDVIINST SIFSRKTISM LIEVILTAAY SAKPYNNKGE NRPVCFPSSN ETSIDTYMQF
AKQCYEHSNP KLSDEELSDK IFCEKILYDP ETDKPYASKV FFGPIYYLRL RHLTQDKATV
RCRGKKTKLI RQANEGRKRG GGIKFGEMER DCLIAHGAAN TITEVLKDSE EDYQDVYVCE
NCGDIAAQIK GINTCLRCSK LNLSPLLTKI DTTHVSKVFL TQMNARGVKV KLDFERRPPS
FYKPLDKVDL KPSFLV