RP147_FOWPN
ID RP147_FOWPN Reviewed; 1287 AA.
AC Q9J593;
DT 29-AUG-2001, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 82.
DE RecName: Full=DNA-directed RNA polymerase 147 kDa polypeptide;
DE EC=2.7.7.6;
GN Name=RPO147; OrderedLocusNames=FPV137;
OS Fowlpox virus (strain NVSL) (FPV).
OC Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes;
OC Chitovirales; Poxviridae; Chordopoxvirinae; Avipoxvirus.
OX NCBI_TaxID=928301;
OH NCBI_TaxID=7742; Vertebrata.
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=10729156; DOI=10.1128/jvi.74.8.3815-3831.2000;
RA Afonso C.L., Tulman E.R., Lu Z., Zsak L., Kutish G.F., Rock D.L.;
RT "The genome of fowlpox virus.";
RL J. Virol. 74:3815-3831(2000).
CC -!- FUNCTION: Part of the DNA-dependent RNA polymerase which catalyzes the
CC transcription of viral DNA into RNA using the four ribonucleoside
CC triphosphates as substrates. Responsible for the transcription of
CC early, intermediate and late genes. DNA-dependent RNA polymerase
CC associates with the early transcription factor (ETF) thereby allowing
CC the early genes transcription. Late transcription, and probably also
CC intermediate transcription, require newly synthesized RNA polymerase
CC (By similarity). {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.6;
CC -!- SUBUNIT: The DNA-dependent RNA polymerase used for intermediate and
CC late genes expression consists of eight subunits (147) kDa, (133) kDa,
CC (35) kDa, (30) kDa, (22) kDa, (19) kDa, (18) kDa and (7) kDa totalling
CC more than 500 kDa in mass. The same holoenzyme, with the addition of
CC the transcription-specificity factor RAP94, is used for early gene
CC expression (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}. Note=All the enzymes and
CC other proteins required to synthesize early mRNAs are packaged within
CC the virion core along with the DNA genome. This is necessary because
CC viral early mRNAs are synthesized within minutes after virus entry into
CC the cell and are extruded through pores in the core particle (By
CC similarity). {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the poxviridae DNA-directed RNA polymerase 147
CC kDa subunit family. {ECO:0000305}.
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DR EMBL; AF198100; AAF44481.1; -; Genomic_DNA.
DR RefSeq; NP_039100.1; NC_002188.1.
DR SMR; Q9J593; -.
DR GeneID; 1486685; -.
DR KEGG; vg:1486685; -.
DR Proteomes; UP000008597; Genome.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0006351; P:transcription, DNA-templated; IEA:InterPro.
DR Gene3D; 1.10.132.30; -; 1.
DR Gene3D; 1.10.274.100; -; 1.
DR Gene3D; 4.10.860.120; -; 1.
DR InterPro; IPR045867; DNA-dir_RpoC_beta_prime.
DR InterPro; IPR000722; RNA_pol_asu.
DR InterPro; IPR006592; RNA_pol_N.
DR InterPro; IPR007066; RNA_pol_Rpb1_3.
DR InterPro; IPR042102; RNA_pol_Rpb1_3_sf.
DR InterPro; IPR007083; RNA_pol_Rpb1_4.
DR InterPro; IPR007081; RNA_pol_Rpb1_5.
DR InterPro; IPR044893; RNA_pol_Rpb1_clamp_domain.
DR InterPro; IPR038120; Rpb1_funnel_sf.
DR PANTHER; PTHR19376; PTHR19376; 1.
DR Pfam; PF00623; RNA_pol_Rpb1_2; 1.
DR Pfam; PF04983; RNA_pol_Rpb1_3; 1.
DR Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR Pfam; PF04998; RNA_pol_Rpb1_5; 1.
DR SMART; SM00663; RPOLA_N; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase; Nucleotidyltransferase; Reference proteome;
KW Transcription; Transferase; Virion.
FT CHAIN 1..1287
FT /note="DNA-directed RNA polymerase 147 kDa polypeptide"
FT /id="PRO_0000073922"
SQ SEQUENCE 1287 AA; 147998 MW; B9DC191393999E62 CRC64;
MSVISKVSYS LYSQNEINAT DININYVKDD DEVGTVKDSR LGATDGVLCR TCNRTELECF
GHWGKVRIYE NIIIKPEYIS EVIRILGHIC LTCGLLRSRE PYTVNISSLT SGELKKLKDK
ISSKKKSCWN SRCMQPYQKV NFSKKKVCLV NKTDEFCVPN ALVYEKITSI HHKFWPVLDI
HQDPATLFYR GYFSIPPLLI RPVISFWIDN VPKDTNELTY LLGVIVKHCN ANADEPTIQK
AIIEYDNIKL ISTNSTTNNL SYITSGKTNM LRSFVVARRK DQTARSVLGP DSSLDITEVG
IPDYVRNTLT EKIFINAFTI DKVKDMFQRG EIKYYFNKQL HQLTKIKQNK FIKNKIHLLP
GDWVETNIQE FTNIIFGRQP SLHRYNVISS SVRKTEEDTI KIPPGIANSQ NADFDGDEEW
TIVEQNPKSV IEQSILMYPT TLLKHDVHGM PVYGSIQDEI LAAYNLFREY DLTQDEVLNI
LGKYGLEFLT DYERKDKYTG KDIFKFLINE PEINYPGIIC NGEIIAENID SNFIVSMKHM
SISGLITDYK SSVEGIKFIN KASYVFKRYL KIYGFSITFR NLCPDFEFTK KLREQNIKKI
NDIKHSYVKY LYDVANGDII PLSRSDEMDA VDSILSGLTN FNIQEIEKYM KEVISKDPDN
SLMKMSCAGY KVNPTELMYI LGTYGQQRID GEPIDTKIYG RVLPYFLPDS KDPEGKGYIL
NSLIQGLTGS QYYYAMLIAR SQSTDIVCET SRTGTLARKI IKKMEDMVVD SYGQIVYGNT
LVKYAANYTK IQGSVCKSVE LIYPDESLTW FLEISALWDK LKNGFIYNQG QKIAKYILAP
FNFKVFMKLD ETNPMKSKDL YDKIQLVIKD VRENYFFDVT SIDFIEYVFL THLNPSRVKV
SEDTANLIFE KLYEKLNYTL GGGTPIGIIS AQVLSEKFTQ QALSSFHTTE KSGGIKRKLG
FNEFNQLTNL SKNKTEIITL ISDDITKLQT IKMNFEFVYL GELFPEITIE EDKNYYRIDI
NVNRLYIKRN QLTELIVEYM LEKFVSYSVL VKNWGMETNI INEHIIRFSL FIVFTEPVNL
NKNKFMMMLP GAANKGKISK YKIPISEYQS YTDYNKTVKL YRLTVELMGL KELGTFDLVN
VNVIPGVWNT YEIFGIESAK SYLCEALLST YGEGLDYLYQ PCDLLASLIC LNYEPESINK
FKFGPVSALK RATFGDNKAI INAALYKKTE PVNDNSSCHF FSKVPKIGTG YYKYFIDLEK
FLRIKKTISE KLIDKKLVDI GDNITDF