RP18_FOWPN
ID RP18_FOWPN Reviewed; 161 AA.
AC P21967; O93018;
DT 01-AUG-1991, integrated into UniProtKB/Swiss-Prot.
DT 01-AUG-1991, sequence version 1.
DT 03-AUG-2022, entry version 76.
DE RecName: Full=DNA-directed RNA polymerase 18 kDa subunit;
DE EC=2.7.7.6;
GN Name=RPO18; OrderedLocusNames=FPV056; ORFNames=FP-D7, FPD7;
OS Fowlpox virus (strain NVSL) (FPV).
OC Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes;
OC Chitovirales; Poxviridae; Chordopoxvirinae; Avipoxvirus.
OX NCBI_TaxID=928301;
OH NCBI_TaxID=7742; Vertebrata.
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=FP-1;
RX PubMed=2165135; DOI=10.1099/0022-1317-71-7-1517;
RA Tartaglia J., Winslow J., Goebel S.J., Johnson G.P., Taylor J.,
RA Paoletti E.;
RT "Nucleotide sequence analysis of a 10.5 kbp HindIII fragment of fowlpox
RT virus: relatedness to the central portion of the vaccinia virus HindIII D
RT region.";
RL J. Gen. Virol. 71:1517-1524(1990).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=FP-9 / Isolate HP-440;
RA Skinner M.A.;
RL Submitted (MAY-1998) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=10729156; DOI=10.1128/jvi.74.8.3815-3831.2000;
RA Afonso C.L., Tulman E.R., Lu Z., Zsak L., Kutish G.F., Rock D.L.;
RT "The genome of fowlpox virus.";
RL J. Virol. 74:3815-3831(2000).
CC -!- FUNCTION: Part of the DNA-dependent RNA polymerase which catalyzes the
CC transcription of viral DNA into RNA using the four ribonucleoside
CC triphosphates as substrates. Responsible for the transcription of
CC early, intermediate and late genes. DNA-dependent RNA polymerase
CC associates with the early transcription factor (ETF) thereby allowing
CC the early genes transcription. Late transcription, and probably also
CC intermediate transcription, require newly synthesized RNA polymerase
CC (By similarity). {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.6;
CC -!- SUBUNIT: The DNA-dependent RNA polymerase used for intermediate and
CC late genes expression consists of eight subunits 147 kDa, 133 kDa, 35
CC kDa, 30 kDa, 22 kDa, 19 kDa, 18 kDa and 7 kDa totalling more than 500
CC kDa in mass. The same holoenzyme, with the addition of the
CC transcription-specificity factor RAP94, is used for early gene
CC expression (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}. Note=All the enzymes and
CC other proteins required to synthesize early mRNAs are packaged within
CC the virion core along with the DNA genome. This is necessary because
CC viral early mRNAs are synthesized within minutes after virus entry into
CC the cell and are extruded through pores in the core particle (By
CC similarity). {ECO:0000250}.
CC -!- INDUCTION: Expressed in the early phase of the viral replicative cycle.
CC -!- SIMILARITY: Belongs to the poxviridae DNA-directed RNA polymerase 18
CC kDa subunit family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAA06398.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
CC Sequence=CAA06398.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; X17202; CAA35070.1; -; Genomic_DNA.
DR EMBL; AJ005163; CAA06398.1; ALT_INIT; Genomic_DNA.
DR EMBL; AF198100; AAF44400.1; -; Genomic_DNA.
DR PIR; G35216; G35216.
DR RefSeq; NP_039019.1; NC_002188.1.
DR SMR; P21967; -.
DR GeneID; 1486604; -.
DR KEGG; vg:1486604; -.
DR Proteomes; UP000008597; Genome.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0019083; P:viral transcription; IEA:InterPro.
DR InterPro; IPR004973; DNA-dir_RNA_pol_18kDa_poxviral.
DR Pfam; PF03293; Pox_RNA_pol; 1.
PE 2: Evidence at transcript level;
KW DNA-directed RNA polymerase; Early protein; Nucleotidyltransferase;
KW Reference proteome; Transcription; Transferase; Virion.
FT CHAIN 1..161
FT /note="DNA-directed RNA polymerase 18 kDa subunit"
FT /id="PRO_0000099154"
SQ SEQUENCE 161 AA; 18014 MW; 4C1752A43CB6D3BD CRC64;
MSLFNTNAYL PVVIQPHELN LDLMDNIKKA VINKYLHKET SGFMAKKIQI VEDTPMPLAE
LVNNEIVVHV TCNIDYKYYK VGDIVSGILT ITDESDISVV CSDLICKIRS DSGTVSYDNS
KYCFIKNGKV YANESTVTVM LKEAQSGMES SFVFLGNIIE K