ID   RP19_VACCA              Reviewed;         164 AA.
AC   Q76ZQ8;
DT   07-DEC-2004, integrated into UniProtKB/Swiss-Prot.
DT   05-JUL-2004, sequence version 1.
DT   03-AUG-2022, entry version 60.
DE   RecName: Full=DNA-directed RNA polymerase 19 kDa subunit;
DE            EC=2.7.7.6;
GN   Name=RPO19; OrderedLocusNames=MVA116R, ACAM3000_MVA_116; ORFNames=A5R;
OS   Vaccinia virus (strain Ankara) (VACV).
OC   Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes;
OC   Chitovirales; Poxviridae; Chordopoxvirinae; Orthopoxvirus; Vaccinia virus.
OX   NCBI_TaxID=126794;
OH   NCBI_TaxID=9606; Homo sapiens (Human).
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=9601507; DOI=10.1006/viro.1998.9123;
RA   Antoine G., Scheiflinger F., Dorner F., Falkner F.G.;
RT   "The complete genomic sequence of the modified vaccinia Ankara strain:
RT   comparison with other orthopoxviruses.";
RL   Virology 244:365-396(1998).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Isolate Acambis 3000;
RA   Esposito J.J., Frace M., Sammons S.A., Olsen-Rasmussen M.S., Osborne J.,
RA   Khristova M., Wohlhueter R.M.;
RL   Submitted (APR-2004) to the EMBL/GenBank/DDBJ databases.
RN   [3]
RP   REVIEW.
RX   PubMed=12917449; DOI=10.1099/vir.0.18942-0;
RA   Broyles S.S.;
RT   "Vaccinia virus transcription.";
RL   J. Gen. Virol. 84:2293-2303(2003).
CC   -!- FUNCTION: Part of the DNA-dependent RNA polymerase which catalyzes the
CC       transcription of viral DNA into RNA using the four ribonucleoside
CC       triphosphates as substrates. Responsible for the transcription of
CC       early, intermediate and late genes. DNA-dependent RNA polymerase
CC       associates with the early transcription factor (ETF), itself composed
CC       of D6 and A7, thereby allowing the early genes transcription. Late
CC       transcription, and probably also intermediate transcription, require
CC       newly synthesized RNA polymerase.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC         RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC         COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC         EC=2.7.7.6;
CC   -!- SUBUNIT: The DNA-dependent RNA polymerase used for intermediate and
CC       late genes expression consists of eight subunits (147) kDa, 133 kDa, 35
CC       kDa, 30 kDa, 22 kDa, 19 kDa, 18 kDa and 7 kDa totalling more than 500
CC       kDa in mass. The same holoenzyme, with the addition of the
CC       transcription-specificity factor RAP94, is used for early gene
CC       expression (By similarity). {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}. Note=All the enzymes and
CC       other proteins required to synthesize early mRNAs are packaged within
CC       the virion core along with the DNA genome. This is necessary because
CC       viral early mRNAs are synthesized within minutes after virus entry into
CC       the cell and are extruded through pores in the core particle.
CC   -!- INDUCTION: Expressed in the early phase of the viral replicative cycle.
CC       Expression seems to continue throughout virus infection.
CC   -!- SIMILARITY: Belongs to the poxviridae DNA-directed RNA polymerase 19
CC       kDa subunit family. {ECO:0000305}.
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DR   EMBL; U94848; AAB96519.1; -; Genomic_DNA.
DR   EMBL; AY603355; AAT10514.1; -; Genomic_DNA.
DR   RefSeq; YP_233006.1; NC_006998.1.
DR   PDB; 6RIE; EM; 3.10 A; F=1-164.
DR   PDBsum; 6RIE; -.
DR   SMR; Q76ZQ8; -.
DR   DNASU; 3707522; -.
DR   GeneID; 3707522; -.
DR   KEGG; vg:3707522; -.
DR   Proteomes; UP000159908; Genome.
DR   Proteomes; UP000172909; Genome.
DR   GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:InterPro.
DR   Gene3D; 3.90.940.10; -; 1.
DR   InterPro; IPR007984; DNA-dir_RNA_Pol_19kDa_poxvir.
DR   InterPro; IPR036161; RPB6/omega-like_sf.
DR   Pfam; PF05320; Pox_RNA_Pol_19; 1.
DR   PIRSF; PIRSF000743; RPO19; 1.
PE   1: Evidence at protein level;
KW   3D-structure; DNA-directed RNA polymerase; Early protein;
KW   Nucleotidyltransferase; Transcription; Transferase; Virion.
FT   CHAIN           1..164
FT                   /note="DNA-directed RNA polymerase 19 kDa subunit"
FT                   /id="PRO_0000099145"
FT   REGION          1..39
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1..32
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   HELIX           63..74
FT                   /evidence="ECO:0007829|PDB:6RIE"
FT   HELIX           79..94
FT                   /evidence="ECO:0007829|PDB:6RIE"
FT   HELIX           108..110
FT                   /evidence="ECO:0007829|PDB:6RIE"
FT   HELIX           113..123
FT                   /evidence="ECO:0007829|PDB:6RIE"
FT   STRAND          128..132
FT                   /evidence="ECO:0007829|PDB:6RIE"
FT   STRAND          135..137
FT                   /evidence="ECO:0007829|PDB:6RIE"
FT   HELIX           144..160
FT                   /evidence="ECO:0007829|PDB:6RIE"
SQ   SEQUENCE   164 AA;  18996 MW;  FCA789E84691B9B9 CRC64;
     MADTDDIIDY ESDDLTEYED DEEEEEDGES LETSDIDPKS SYKIVESAST HIEDAHSNLK
     HIGNHISALK RRYTRRISLF EIAGIIAESY NLLQRGRLPL VSEFSDETMK QNMLHVIIQE
     IEEGSCPIVI EKNGELLSVN DFDKDGLKFH LDYIIKIWKL QKRY