RP8L2_ARATH
ID RP8L2_ARATH Reviewed; 906 AA.
AC P0C8S1; F4HRG3; O64976; Q9MAG6;
DT 03-MAR-2009, integrated into UniProtKB/Swiss-Prot.
DT 03-MAR-2009, sequence version 1.
DT 03-AUG-2022, entry version 82.
DE RecName: Full=Probable disease resistance RPP8-like protein 2;
GN Name=RPP8L2; OrderedLocusNames=At1g53350; ORFNames=F12M16.35;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 199-356.
RC STRAIN=cv. Landsberg erecta;
RX PubMed=9530866; DOI=10.1094/mpmi.1998.11.4.251;
RA Aarts M.G.M., te Lintel Hekkert B., Holub E.B., Beynon J.L., Stiekema W.J.,
RA Pereira A.;
RT "Identification of R-gene homologous DNA fragments genetically linked to
RT disease resistance loci in Arabidopsis thaliana.";
RL Mol. Plant Microbe Interact. 11:251-258(1998).
CC -!- FUNCTION: Potential disease resistance protein.
CC -!- DOMAIN: The LRR repeats probably act as specificity determinant of
CC pathogen recognition. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the disease resistance NB-LRR family. RPP8/HRT
CC subfamily. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAF69538.1; Type=Erroneous gene model prediction; Note=The predicted gene has been split into 2 genes: At1g53350 and At1g53360.; Evidence={ECO:0000305};
CC -!- WEB RESOURCE: Name=NIB-LRRS; Note=Functional and comparative genomics
CC of disease resistance gene homologs;
CC URL="http://niblrrs.ucdavis.edu";
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DR EMBL; AC008007; AAF69538.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE32929.2; -; Genomic_DNA.
DR EMBL; AF039382; AAC14558.1; -; Genomic_DNA.
DR PIR; F96573; F96573.
DR RefSeq; NP_001319213.1; NM_001333589.1.
DR AlphaFoldDB; P0C8S1; -.
DR SMR; P0C8S1; -.
DR BioGRID; 26996; 1.
DR STRING; 3702.AT1G53350.1; -.
DR iPTMnet; P0C8S1; -.
DR PaxDb; P0C8S1; -.
DR PRIDE; P0C8S1; -.
DR ProteomicsDB; 228221; -.
DR EnsemblPlants; AT1G53350.1; AT1G53350.1; AT1G53350.
DR GeneID; 841771; -.
DR Gramene; AT1G53350.1; AT1G53350.1; AT1G53350.
DR KEGG; ath:AT1G53350; -.
DR Araport; AT1G53350; -.
DR eggNOG; KOG4658; Eukaryota.
DR HOGENOM; CLU_000837_25_4_1; -.
DR InParanoid; P0C8S1; -.
DR OMA; DEVWNPL; -.
DR OrthoDB; 164862at2759; -.
DR PhylomeDB; P0C8S1; -.
DR PRO; PR:P0C8S1; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; P0C8S1; baseline and differential.
DR Genevisible; P0C8S1; AT.
DR GO; GO:0043531; F:ADP binding; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0006952; P:defense response; IEA:UniProtKB-KW.
DR GO; GO:0051707; P:response to other organism; IEA:UniProt.
DR CDD; cd14798; RX-CC_like; 1.
DR Gene3D; 1.10.10.10; -; 1.
DR Gene3D; 1.10.8.430; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR042197; Apaf_helical.
DR InterPro; IPR044974; Disease_R_plants.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR002182; NB-ARC.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038005; RX-like_CC.
DR InterPro; IPR041118; Rx_N.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR23155; PTHR23155; 1.
DR Pfam; PF00931; NB-ARC; 1.
DR Pfam; PF18052; Rx_N; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
PE 3: Inferred from homology;
KW ATP-binding; Coiled coil; Leucine-rich repeat; Nucleotide-binding;
KW Plant defense; Reference proteome; Repeat.
FT CHAIN 1..906
FT /note="Probable disease resistance RPP8-like protein 2"
FT /id="PRO_0000212722"
FT DOMAIN 144..454
FT /note="NB-ARC"
FT REPEAT 573..597
FT /note="LRR 1"
FT REPEAT 598..621
FT /note="LRR 2"
FT REPEAT 623..644
FT /note="LRR 3"
FT REPEAT 646..671
FT /note="LRR 4"
FT REPEAT 672..696
FT /note="LRR 5"
FT REPEAT 704..727
FT /note="LRR 6"
FT REPEAT 740..766
FT /note="LRR 7"
FT REPEAT 767..790
FT /note="LRR 8"
FT REPEAT 791..818
FT /note="LRR 9"
FT REPEAT 840..865
FT /note="LRR 10"
FT COILED 15..68
FT /evidence="ECO:0000255"
FT BINDING 190..197
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255"
FT CONFLICT 248
FT /note="M -> T (in Ref. 3; AAC14558)"
FT /evidence="ECO:0000305"
FT CONFLICT 339
FT /note="T -> TA (in Ref. 3; AAC14558)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 906 AA; 104063 MW; E6FDF4A8FE398D0B CRC64;
MAEAVVSFGV EKLWELLSRE SARLNGIDEQ VDGLKRQLGR LQSLLKDADA KKNETERVRN
FLEDVKDIVY DADDIIESFL LNELRGKEKG IKKQVRTLAC FLVDRRKFAS DIEGITKRIS
EVIVGMQSLG IQHIADGGGR SLSLQERQRE IRQTFSRNSE SDLVGLDQSV EELVDHLVEN
DSVQVVSVSG MGGIGKTTLA RQVFHHDIVR RHFDGFSWVC VSQQFTRKDV WQRILQDLRP
YDEGIIQMDE YTLQGELFEL LESGRYLLVL DDVWKEEDWD RIKAVFPHKR GWKMLLTSRN
EGLGLHADPT CFAFRPRILT PEQSWKLFER IVSSRRDKTE FKVDEAMGKE MVTYCGGLPL
AVKVLGGLLA KKHTVLEWKR VHSNIVTHIV GKSGLSDDNS NSVYRVLSLS YEDLPMQLKH
CFFYLAHFPE DYKIDVKILF NYWVAEGIIT PFHDGSTIQD TGESYLEELV RRNMVVVEES
YLTSRIEYCQ MHDMMREVCL SKAKEENFIR VVKVPTTTST TINAQSPCRS RRLVLHSGNA
LHMLGHKDNK KARSVLIFGV EEKFWKPRGF QCLPLLRVLD LSYVQFEGGK LPSSIGDLIH
LRFLSLYEAG VSHLPSSLGN LKLLLCLNLG VADRLLVHVP NVLKEMQELR YLRLPRSMPA
KTKLELGDLV NLESLTNFST KHGSVTDLLR MTKLSVLNVI FSGECTFETL LLSLRELRNL
ETLSFHDFQK VSVANHGGEL LVLDFIHLKD LTLSMHLPRF PDQYRFPPHL AHIWLIGCRM
EEDPMPILEK LLHLKSVYLS SGAFLGRRMV CSKGGFPQLL ALKMSYKKEL VEWRVEEGSM
PCLRTLTIDN CKKLKQLPDG LKYVTCLKEL KIERMKREWT ERLVIGGEDY YKVQHIPSVQ
FINCDH