RP8L3_ARATH
ID RP8L3_ARATH Reviewed; 901 AA.
AC Q9FJB5; O64978; O64979; Q0WUX1;
DT 11-APR-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 140.
DE RecName: Full=Disease resistance RPP8-like protein 3;
GN Name=RPP8L3; OrderedLocusNames=At5g35450; ORFNames=K21B8.10, MOK9.3;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9872454; DOI=10.1093/dnares/5.5.297;
RA Nakamura Y., Sato S., Asamizu E., Kaneko T., Kotani H., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. VII. Sequence
RT features of the regions of 1,013,767 bp covered by sixteen physically
RT assigned P1 and TAC clones.";
RL DNA Res. 5:297-308(1998).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 453-581 AND 772-901.
RX PubMed=9530866; DOI=10.1094/mpmi.1998.11.4.251;
RA Aarts M.G.M., te Lintel Hekkert B., Holub E.B., Beynon J.L., Stiekema W.J.,
RA Pereira A.;
RT "Identification of R-gene homologous DNA fragments genetically linked to
RT disease resistance loci in Arabidopsis thaliana.";
RL Mol. Plant Microbe Interact. 11:251-258(1998).
CC -!- FUNCTION: Disease resistance protein.
CC -!- DOMAIN: The LRR repeats probably act as specificity determinant of
CC pathogen recognition. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the disease resistance NB-LRR family. RPP8/HRT
CC subfamily. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAC14261.1; Type=Frameshift; Evidence={ECO:0000305};
CC -!- WEB RESOURCE: Name=NIB-LRRS; Note=Functional and comparative genomics
CC of disease resistance gene homologs;
CC URL="http://niblrrs.ucdavis.edu";
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DR EMBL; AB015477; BAB08703.1; -; Genomic_DNA.
DR EMBL; CP002688; AED93968.1; -; Genomic_DNA.
DR EMBL; CP002688; ANM70947.1; -; Genomic_DNA.
DR EMBL; AK227013; BAE99077.1; -; mRNA.
DR EMBL; AH006046; AAC14262.1; -; Genomic_DNA.
DR EMBL; AH006046; AAC14261.1; ALT_FRAME; Genomic_DNA.
DR RefSeq; NP_001332515.1; NM_001344104.1.
DR RefSeq; NP_198395.1; NM_122936.5.
DR AlphaFoldDB; Q9FJB5; -.
DR SMR; Q9FJB5; -.
DR STRING; 3702.AT5G35450.1; -.
DR iPTMnet; Q9FJB5; -.
DR PaxDb; Q9FJB5; -.
DR PRIDE; Q9FJB5; -.
DR ProteomicsDB; 227978; -.
DR EnsemblPlants; AT5G35450.1; AT5G35450.1; AT5G35450.
DR EnsemblPlants; AT5G35450.2; AT5G35450.2; AT5G35450.
DR GeneID; 833508; -.
DR Gramene; AT5G35450.1; AT5G35450.1; AT5G35450.
DR Gramene; AT5G35450.2; AT5G35450.2; AT5G35450.
DR KEGG; ath:AT5G35450; -.
DR Araport; AT5G35450; -.
DR TAIR; locus:2169523; AT5G35450.
DR eggNOG; KOG4658; Eukaryota.
DR HOGENOM; CLU_000837_25_4_1; -.
DR InParanoid; Q9FJB5; -.
DR OMA; HISLRIC; -.
DR OrthoDB; 164862at2759; -.
DR PhylomeDB; Q9FJB5; -.
DR PRO; PR:Q9FJB5; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FJB5; baseline and differential.
DR Genevisible; Q9FJB5; AT.
DR GO; GO:0043531; F:ADP binding; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0006952; P:defense response; IEA:UniProtKB-KW.
DR GO; GO:0051707; P:response to other organism; IEA:UniProt.
DR CDD; cd14798; RX-CC_like; 1.
DR Gene3D; 1.10.10.10; -; 1.
DR Gene3D; 1.10.8.430; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR042197; Apaf_helical.
DR InterPro; IPR044974; Disease_R_plants.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR002182; NB-ARC.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038005; RX-like_CC.
DR InterPro; IPR041118; Rx_N.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR23155; PTHR23155; 1.
DR Pfam; PF00931; NB-ARC; 1.
DR Pfam; PF18052; Rx_N; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
PE 2: Evidence at transcript level;
KW ATP-binding; Coiled coil; Leucine-rich repeat; Nucleotide-binding;
KW Plant defense; Reference proteome; Repeat.
FT CHAIN 1..901
FT /note="Disease resistance RPP8-like protein 3"
FT /id="PRO_0000212723"
FT DOMAIN 144..453
FT /note="NB-ARC"
FT REPEAT 567..591
FT /note="LRR 1"
FT REPEAT 592..615
FT /note="LRR 2"
FT REPEAT 833..858
FT /note="LRR 3"
FT COILED 15..56
FT /evidence="ECO:0000255"
FT BINDING 190..197
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255"
FT BINDING 385..392
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255"
FT CONFLICT 453..460
FT /note="ILDSGEDY -> DGGGGEND (in Ref. 4; AAC14262)"
FT /evidence="ECO:0000305"
FT CONFLICT 810
FT /note="P -> L (in Ref. 4; AAC14261)"
FT /evidence="ECO:0000305"
FT CONFLICT 862
FT /note="E -> R (in Ref. 4; AAC14261)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 901 AA; 103767 MW; 0D1F1512C11AF8C7 CRC64;
MAEGVVSFGV QKLWALLNRE SERLNGIDEQ VDGLKRQLRG LQSLLKDADA KKHGSDRVRN
FLEDVKDLVF DAEDIIESYV LNKLRGEGKG VKNHVRRLAC FLTDRHKVAS DIEGITKRIS
KVIGEMQSLG IQQQIIDGGR SLSLQDIQRE IRQTFPNSSE SDLVGVEQSV EELVGPMVEI
DNIQVVSISG MGGIGKTTLA RQIFHHDLVR RHFDGFAWVC VSQQFTQKHV WQRILQELRP
HDGEILQMDE YTIQGKLFQL LETGRYLVVL DDVWKEEDWD RIKEVFPRKR GWKMLLTSRN
EGVGLHADPT CLSFRARILN PKESWKLFER IVPRRNETEY EEMEAIGKEM VTYCGGLPLA
VKVLGGLLAN KHTASEWKRV SENIGAQIVG KSCLDDNSLN SVYRILSLSY EDLPTDLKHC
FLYLAHFPED YKIKTRTLYS YWAAEGIYDG LTILDSGEDY LEELVRRNLV IAEKSNLSWR
LKLCQMHDMM REVCISKAKV ENFLQIIKVP TSTSTIIAQS PSRSRRLTVH SGKAFHILGH
KKKVRSLLVL GLKEDLWIQS ASRFQSLPLL RVLDLSSVKF EGGKLPSSIG GLIHLRFLSL
HQAVVSHLPS TIRNLKLMLY LNLHVAIGVP VHVPNVLKEM LELRYLSLPL DMHDKTKLEL
GDLVNLEYLW CFSTQHSSVT DLLRMTKLRF FGVSFSERCT FENLSSSLRQ FRKLETLSFI
YSRKTYMVDY VGEFVLDFIH LKKLSLGVHL SKIPDQHQLP PHIAHIYLLF CHMEEDPMPI
LEKLLHLKSV ELRRKAFIGR RMVCSKGGFP QLRALQISEQ SELEEWIVEE GSMPCLRDLI
IHSCEKLEEL PDGLKYVTSL KELKIEGMKR EWKEKLVGED YYKVQHIPDV QFFNCDDEQR
E