ID   RPB11_PLABA             Reviewed;         126 AA.
AC   Q4YZZ7;
DT   18-APR-2006, integrated into UniProtKB/Swiss-Prot.
DT   05-JUL-2005, sequence version 1.
DT   25-MAY-2022, entry version 75.
DE   RecName: Full=Probable DNA-directed RNA polymerase II subunit RPB11;
DE            Short=RNA polymerase II subunit B11;
DE   AltName: Full=DNA-directed RNA polymerase II subunit J;
GN   ORFNames=PB000758.01.0;
OS   Plasmodium berghei (strain Anka).
OC   Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida;
OC   Plasmodiidae; Plasmodium; Plasmodium (Vinckeia).
OX   NCBI_TaxID=5823;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ANKA;
RX   PubMed=15637271; DOI=10.1126/science.1103717;
RA   Hall N., Karras M., Raine J.D., Carlton J.M., Kooij T.W.A., Berriman M.,
RA   Florens L., Janssen C.S., Pain A., Christophides G.K., James K.,
RA   Rutherford K., Harris B., Harris D., Churcher C.M., Quail M.A., Ormond D.,
RA   Doggett J., Trueman H.E., Mendoza J., Bidwell S.L., Rajandream M.A.,
RA   Carucci D.J., Yates J.R. III, Kafatos F.C., Janse C.J., Barrell B.G.,
RA   Turner C.M.R., Waters A.P., Sinden R.S.;
RT   "A comprehensive survey of the Plasmodium life cycle by genomic,
RT   transcriptomic, and proteomic analyses.";
RL   Science 307:82-86(2005).
CC   -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of
CC       DNA into RNA using the four ribonucleoside triphosphates as substrates.
CC       Component of RNA polymerase II which synthesizes mRNA precursors and
CC       many functional non-coding RNAs. Pol II is the central component of the
CC       basal RNA polymerase II transcription machinery. It is composed of
CC       mobile elements that move relative to each other. RPB11 is part of the
CC       core element with the central large cleft (By similarity).
CC       {ECO:0000250}.
CC   -!- SUBUNIT: Component of the RNA polymerase II (Pol II) complex consisting
CC       of 12 subunits. {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC   -!- SIMILARITY: Belongs to the archaeal Rpo11/eukaryotic RPB11/RPC19 RNA
CC       polymerase subunit family. {ECO:0000305}.
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DR   EMBL; CAAI01001416; CAH96395.1; -; Genomic_DNA.
DR   RefSeq; XP_678325.1; XM_673233.1.
DR   AlphaFoldDB; Q4YZZ7; -.
DR   SMR; Q4YZZ7; -.
DR   STRING; 5821.PBANKA_140340; -.
DR   VEuPathDB; PlasmoDB:PBANKA_1403400; -.
DR   eggNOG; KOG4392; Eukaryota.
DR   HOGENOM; CLU_090381_2_2_1; -.
DR   InParanoid; Q4YZZ7; -.
DR   OMA; CNIFTIK; -.
DR   GO; GO:0005665; C:RNA polymerase II, core complex; IEA:InterPro.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR   GO; GO:0001055; F:RNA polymerase II activity; IEA:InterPro.
DR   CDD; cd06926; RNAP_II_RPB11; 1.
DR   Gene3D; 3.30.1360.10; -; 1.
DR   HAMAP; MF_00261; RNApol_arch_Rpo11; 1.
DR   InterPro; IPR037685; RBP11.
DR   InterPro; IPR036603; RBP11-like.
DR   InterPro; IPR009025; RBP11-like_dimer.
DR   InterPro; IPR008193; RNA_pol_Rpb11_13-16kDa_CS.
DR   Pfam; PF13656; RNA_pol_L_2; 1.
DR   SUPFAM; SSF55257; SSF55257; 1.
DR   PROSITE; PS01154; RNA_POL_L_13KD; 1.
PE   3: Inferred from homology;
KW   DNA-directed RNA polymerase; Nucleus; Transcription.
FT   CHAIN           1..126
FT                   /note="Probable DNA-directed RNA polymerase II subunit
FT                   RPB11"
FT                   /id="PRO_0000232462"
SQ   SEQUENCE   126 AA;  14206 MW;  139200EAE6F8EC54 CRC64;
     MSVPTLSNKP ENVDLLVLPH GEEKVKCQIS DKGDCNIFTI KLEDHTIGNL IKQSLCQDPK
     VTFAAYRQPH PLQNVIEITI RPKGYAGVKL LSDNVHTILN QVSTLRETFV NKVQKYKEKN
     ACHGNR