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RPB1_CAEEL
ID   RPB1_CAEEL              Reviewed;        1856 AA.
AC   P16356; Q20090;
DT   01-AUG-1990, integrated into UniProtKB/Swiss-Prot.
DT   21-MAR-2012, sequence version 3.
DT   03-AUG-2022, entry version 180.
DE   RecName: Full=DNA-directed RNA polymerase II subunit RPB1;
DE            Short=RNA polymerase II subunit B1;
DE            EC=2.7.7.6;
DE   AltName: Full=DNA-directed RNA polymerase III largest subunit;
GN   Name=ama-1 {ECO:0000312|WormBase:F36A4.7};
GN   Synonyms=rpb-1 {ECO:0000312|WormBase:F36A4.7};
GN   ORFNames=F36A4.7 {ECO:0000312|WormBase:F36A4.7};
OS   Caenorhabditis elegans.
OC   Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC   Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC   Caenorhabditis.
OX   NCBI_TaxID=6239;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA].
RC   STRAIN=Bristol N2;
RX   PubMed=2586513; DOI=10.1128/mcb.9.10.4119-4130.1989;
RA   Bird D.M., Riddle D.L.;
RT   "Molecular cloning and sequencing of ama-1, the gene encoding the largest
RT   subunit of Caenorhabditis elegans RNA polymerase II.";
RL   Mol. Cell. Biol. 9:4119-4130(1989).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Bristol N2;
RX   PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG   The C. elegans sequencing consortium;
RT   "Genome sequence of the nematode C. elegans: a platform for investigating
RT   biology.";
RL   Science 282:2012-2018(1998).
RN   [3]
RP   PHOSPHORYLATION.
RX   PubMed=11960010; DOI=10.1073/pnas.082618399;
RA   Wallenfang M.R., Seydoux G.;
RT   "cdk-7 is required for mRNA transcription and cell cycle progression in
RT   Caenorhabditis elegans embryos.";
RL   Proc. Natl. Acad. Sci. U.S.A. 99:5527-5532(2002).
RN   [4]
RP   FUNCTION, SUBCELLULAR LOCATION, DEVELOPMENTAL STAGE, PHOSPHORYLATION, AND
RP   DISRUPTION PHENOTYPE.
RX   PubMed=14726532; DOI=10.1074/jbc.m310731200;
RA   Walker A.K., Shi Y., Blackwell T.K.;
RT   "An extensive requirement for transcription factor IID-specific TAF-1 in
RT   Caenorhabditis elegans embryonic transcription.";
RL   J. Biol. Chem. 279:15339-15347(2004).
RN   [5]
RP   SUBCELLULAR LOCATION, AND PHOSPHORYLATION.
RX   PubMed=17291483; DOI=10.1016/j.ydbio.2006.12.039;
RA   Walker A.K., Boag P.R., Blackwell T.K.;
RT   "Transcription reactivation steps stimulated by oocyte maturation in C.
RT   elegans.";
RL   Dev. Biol. 304:382-393(2007).
RN   [6]
RP   SUBCELLULAR LOCATION, AND PHOSPHORYLATION.
RX   PubMed=23903194; DOI=10.1242/dev.095778;
RA   Bowman E.A., Bowman C.R., Ahn J.H., Kelly W.G.;
RT   "Phosphorylation of RNA polymerase II is independent of P-TEFb in the C.
RT   elegans germline.";
RL   Development 140:3703-3713(2013).
RN   [7]
RP   DEPHOSPHORYLATION BY SSUP-72.
RX   PubMed=26588990; DOI=10.1101/gad.266650.115;
RA   Chen F., Zhou Y., Qi Y.B., Khivansara V., Li H., Chun S.Y., Kim J.K.,
RA   Fu X.D., Jin Y.;
RT   "Context-dependent modulation of Pol II CTD phosphatase SSUP-72 regulates
RT   alternative polyadenylation in neuronal development.";
RL   Genes Dev. 29:2377-2390(2015).
RN   [8]
RP   FUNCTION, INTERACTION WITH SIG-7, SUBCELLULAR LOCATION, AND DISRUPTION
RP   PHENOTYPE.
RX   PubMed=27541139; DOI=10.1371/journal.pgen.1006227;
RA   Ahn J.H., Rechsteiner A., Strome S., Kelly W.G.;
RT   "A conserved nuclear cyclophilin is required for both RNA polymerase II
RT   elongation and co-transcriptional splicing in Caenorhabditis elegans.";
RL   PLoS Genet. 12:E1006227-E1006227(2016).
CC   -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of
CC       DNA into RNA using the four ribonucleoside triphosphates as substrates.
CC       Largest and catalytic component of RNA polymerase II which synthesizes
CC       mRNA precursors and many functional non-coding RNAs. Forms the
CC       polymerase active center together with the second largest subunit. Pol
CC       II is the central component of the basal RNA polymerase II
CC       transcription machinery. It is composed of mobile elements that move
CC       relative to each other. RPB1 is part of the core element with the
CC       central large cleft, the clamp element that moves to open and close the
CC       cleft and the jaws that are thought to grab the incoming DNA template.
CC       At the start of transcription, a single-stranded DNA template strand of
CC       the promoter is positioned within the central active site cleft of Pol
CC       II. A bridging helix emanates from RPB1 and crosses the cleft near the
CC       catalytic site and is thought to promote translocation of Pol II by
CC       acting as a ratchet that moves the RNA-DNA hybrid through the active
CC       site by switching from straight to bent conformations at each step of
CC       nucleotide addition. During transcription elongation, Pol II moves on
CC       the template as the transcript elongates. Elongation is influenced by
CC       the phosphorylation status of the C-terminal domain (CTD) of Pol II
CC       largest subunit (RPB1), which serves as a platform for assembly of
CC       factors that regulate transcription initiation, elongation, termination
CC       and mRNA processing (By similarity). Involved in the transcription of
CC       several genes including those involved in embryogenesis
CC       (PubMed:14726532, PubMed:27541139). {ECO:0000250|UniProtKB:P24928,
CC       ECO:0000269|PubMed:14726532, ECO:0000269|PubMed:27541139}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC         RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC         COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC         EC=2.7.7.6;
CC   -!- SUBUNIT: Component of the RNA polymerase II (Pol II) complex consisting
CC       of 12 subunits (By similarity). Interacts with sig-7 (PubMed:27541139).
CC       {ECO:0000250|UniProtKB:P24928, ECO:0000269|PubMed:27541139}.
CC   -!- INTERACTION:
CC       P16356; Q9N337: mdt-6; NbExp=2; IntAct=EBI-1533906, EBI-1533827;
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:14726532,
CC       ECO:0000269|PubMed:17291483, ECO:0000269|PubMed:23903194}. Chromosome
CC       {ECO:0000269|PubMed:27541139}. Note=Localizes to punctate nucleoplasmic
CC       structures in the nuclei of interphase somatic cells when
CC       phosphorylated at 'Ser-5' of the C-terminal heptapeptide repeat
CC       (PubMed:14726532). A similar localization occurs in early developing
CC       oocytes when phosphorylated at 'Ser-2' and 'Ser-5' of the C-terminal
CC       heptapeptide repeat (PubMed:17291483). Localizes to the nucleus of
CC       embryonic somatic and germline cells when phosphorylated at 'Ser-2' of
CC       the C-terminal heptapeptide repeat (PubMed:23903194). Localizes to two
CC       discrete foci in the transcriptionally silent germ line nucleus
CC       (PubMed:14726532, PubMed:17291483). Co-localizes with transcriptionally
CC       active chromatin in all autosomes of mitotic and meiotic nuclei in germ
CC       cells (PubMed:27541139). {ECO:0000269|PubMed:14726532,
CC       ECO:0000269|PubMed:17291483, ECO:0000269|PubMed:23903194,
CC       ECO:0000269|PubMed:27541139}.
CC   -!- DEVELOPMENTAL STAGE: Expressed in embryo. During embryonic development,
CC       the form phosphorylated at 'Ser-2' of the C-terminal heptapeptide
CC       repeats is present only in transcriptionally active somatic cells.
CC       {ECO:0000269|PubMed:14726532}.
CC   -!- DOMAIN: The C-terminal domain (CTD) serves as a platform for assembly
CC       of factors that regulate transcription initiation, elongation,
CC       termination and mRNA processing. {ECO:0000305}.
CC   -!- PTM: The tandem 7 residues repeats in the C-terminal domain (CTD) can
CC       be highly phosphorylated. The phosphorylation activates Pol II (By
CC       similarity). Phosphorylation occurs mainly at residues 'Ser-2' and
CC       'Ser-5' of the heptapeptide repeat and starts at the 3- to 4-cell
CC       embryonic stage (PubMed:14726532, PubMed:17291483). This
CC       phosphorylation also occurs in the early stages of oocyte development
CC       and is not detected in oocytes arrested at the meiotic diakinesis stage
CC       (PubMed:17291483). In the somatic lineage, phosphorylation at 'Ser-2'
CC       is mediated by cdk-12 downstream of cdk-9 whereas in the germline
CC       lineage cdk-12 phosphorylates 'Ser-2' independently of cdk-9
CC       (PubMed:23903194). Phosphorylation is likely mediated by cdk-7
CC       (PubMed:11960010). May be dephosphorylated by fcp-1 in diakinetic
CC       oocytes and in 1-cell and 2-cell embryos (PubMed:17291483).
CC       Dephosphorylated at 'Ser-5' of the heptapeptide repeats by ssup-72
CC       (PubMed:26588990). The phosphorylation state is believed to result from
CC       the balanced action of site-specific CTD kinases and phosphatase, and a
CC       'CTD code' that specifies the position of Pol II within the
CC       transcription cycle has been proposed (By similarity).
CC       {ECO:0000250|UniProtKB:P24928, ECO:0000269|PubMed:14726532,
CC       ECO:0000269|PubMed:17291483, ECO:0000269|PubMed:23903194,
CC       ECO:0000269|PubMed:26588990, ECO:0000303|PubMed:11960010}.
CC   -!- DISRUPTION PHENOTYPE: RNAi-mediated knockdown results in embryonic
CC       arrest at the 100-cell stage and prevents the embryonic transcription
CC       of several genes (PubMed:14726532). Surviving embryos exhibit
CC       gastrulation defects with decreased expression of genes involved in
CC       gastrulation (PubMed:27541139). {ECO:0000269|PubMed:14726532,
CC       ECO:0000269|PubMed:27541139}.
CC   -!- MISCELLANEOUS: The binding of ribonucleoside triphosphate to the RNA
CC       polymerase II transcribing complex probably involves a two-step
CC       mechanism. The initial binding seems to occur at the entry (E) site and
CC       involves a magnesium ion temporarily coordinated by three conserved
CC       aspartate residues of the two largest RNA Pol II subunits. The
CC       ribonucleoside triphosphate is transferred by a rotation to the
CC       nucleotide addition (A) site for pairing with the template DNA. The
CC       catalytic A site involves three conserved aspartate residues of the RNA
CC       Pol II largest subunit which permanently coordinate a second magnesium
CC       ion.
CC   -!- SIMILARITY: Belongs to the RNA polymerase beta' chain family.
CC       {ECO:0000305}.
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DR   EMBL; M29235; AAA28126.1; -; mRNA.
DR   EMBL; BX284604; CCD69532.1; -; Genomic_DNA.
DR   PIR; A34092; A34092.
DR   PIR; T29959; T29959.
DR   RefSeq; NP_500523.4; NM_068122.6.
DR   AlphaFoldDB; P16356; -.
DR   SMR; P16356; -.
DR   BioGRID; 42323; 37.
DR   IntAct; P16356; 5.
DR   STRING; 6239.F36A4.7; -.
DR   iPTMnet; P16356; -.
DR   EPD; P16356; -.
DR   PaxDb; P16356; -.
DR   PeptideAtlas; P16356; -.
DR   EnsemblMetazoa; F36A4.7.1; F36A4.7.1; WBGene00000123.
DR   GeneID; 177190; -.
DR   KEGG; cel:CELE_F36A4.7; -.
DR   UCSC; F36A4.7; c. elegans.
DR   CTD; 247749; -.
DR   WormBase; F36A4.7; CE46402; WBGene00000123; ama-1.
DR   eggNOG; KOG0260; Eukaryota.
DR   GeneTree; ENSGT00930000151033; -.
DR   HOGENOM; CLU_000487_0_2_1; -.
DR   InParanoid; P16356; -.
DR   OMA; SLLHICM; -.
DR   OrthoDB; 591636at2759; -.
DR   PhylomeDB; P16356; -.
DR   Reactome; R-CEL-112382; Formation of RNA Pol II elongation complex.
DR   Reactome; R-CEL-113418; Formation of the Early Elongation Complex.
DR   Reactome; R-CEL-5578749; Transcriptional regulation by small RNAs.
DR   Reactome; R-CEL-674695; RNA Polymerase II Pre-transcription Events.
DR   Reactome; R-CEL-6781823; Formation of TC-NER Pre-Incision Complex.
DR   Reactome; R-CEL-6782135; Dual incision in TC-NER.
DR   Reactome; R-CEL-6782210; Gap-filling DNA repair synthesis and ligation in TC-NER.
DR   Reactome; R-CEL-6796648; TP53 Regulates Transcription of DNA Repair Genes.
DR   Reactome; R-CEL-6803529; FGFR2 alternative splicing.
DR   Reactome; R-CEL-6807505; RNA polymerase II transcribes snRNA genes.
DR   Reactome; R-CEL-72086; mRNA Capping.
DR   Reactome; R-CEL-72163; mRNA Splicing - Major Pathway.
DR   Reactome; R-CEL-72165; mRNA Splicing - Minor Pathway.
DR   Reactome; R-CEL-73776; RNA Polymerase II Promoter Escape.
DR   Reactome; R-CEL-73779; RNA Polymerase II Transcription Pre-Initiation And Promoter Opening.
DR   Reactome; R-CEL-75953; RNA Polymerase II Transcription Initiation.
DR   Reactome; R-CEL-75955; RNA Polymerase II Transcription Elongation.
DR   Reactome; R-CEL-76042; RNA Polymerase II Transcription Initiation And Promoter Clearance.
DR   Reactome; R-CEL-77075; RNA Pol II CTD phosphorylation and interaction with CE.
DR   Reactome; R-CEL-9018519; Estrogen-dependent gene expression.
DR   PRO; PR:P16356; -.
DR   Proteomes; UP000001940; Chromosome IV.
DR   Bgee; WBGene00000123; Expressed in embryo and 7 other tissues.
DR   GO; GO:0005694; C:chromosome; IDA:UniProtKB.
DR   GO; GO:0000791; C:euchromatin; IDA:UniProtKB.
DR   GO; GO:0016604; C:nuclear body; IDA:UniProtKB.
DR   GO; GO:0005634; C:nucleus; IDA:WormBase.
DR   GO; GO:0005665; C:RNA polymerase II, core complex; IBA:GO_Central.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; ISS:WormBase.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.
DR   GO; GO:0007369; P:gastrulation; IMP:WormBase.
DR   GO; GO:0042789; P:mRNA transcription by RNA polymerase II; IMP:WormBase.
DR   GO; GO:2000543; P:positive regulation of gastrulation; IMP:UniProtKB.
DR   GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IMP:UniProtKB.
DR   GO; GO:0006351; P:transcription, DNA-templated; IMP:WormBase.
DR   Gene3D; 1.10.132.30; -; 1.
DR   Gene3D; 1.10.274.100; -; 1.
DR   Gene3D; 3.30.1360.140; -; 1.
DR   Gene3D; 4.10.860.120; -; 2.
DR   InterPro; IPR045867; DNA-dir_RpoC_beta_prime.
DR   InterPro; IPR000722; RNA_pol_asu.
DR   InterPro; IPR000684; RNA_pol_II_repeat_euk.
DR   InterPro; IPR006592; RNA_pol_N.
DR   InterPro; IPR007080; RNA_pol_Rpb1_1.
DR   InterPro; IPR007066; RNA_pol_Rpb1_3.
DR   InterPro; IPR042102; RNA_pol_Rpb1_3_sf.
DR   InterPro; IPR007083; RNA_pol_Rpb1_4.
DR   InterPro; IPR007081; RNA_pol_Rpb1_5.
DR   InterPro; IPR007075; RNA_pol_Rpb1_6.
DR   InterPro; IPR007073; RNA_pol_Rpb1_7.
DR   InterPro; IPR038593; RNA_pol_Rpb1_7_sf.
DR   InterPro; IPR044893; RNA_pol_Rpb1_clamp_domain.
DR   InterPro; IPR038120; Rpb1_funnel_sf.
DR   PANTHER; PTHR19376; PTHR19376; 1.
DR   Pfam; PF04997; RNA_pol_Rpb1_1; 1.
DR   Pfam; PF00623; RNA_pol_Rpb1_2; 1.
DR   Pfam; PF04983; RNA_pol_Rpb1_3; 1.
DR   Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR   Pfam; PF04998; RNA_pol_Rpb1_5; 1.
DR   Pfam; PF04992; RNA_pol_Rpb1_6; 1.
DR   Pfam; PF04990; RNA_pol_Rpb1_7; 1.
DR   Pfam; PF05001; RNA_pol_Rpb1_R; 22.
DR   SMART; SM00663; RPOLA_N; 1.
DR   PROSITE; PS00115; RNA_POL_II_REPEAT; 26.
PE   1: Evidence at protein level;
KW   Chromosome; DNA-binding; DNA-directed RNA polymerase; Magnesium;
KW   Metal-binding; Nucleotidyltransferase; Nucleus; Phosphoprotein;
KW   Reference proteome; Repeat; Transcription; Transferase; Zinc.
FT   CHAIN           1..1856
FT                   /note="DNA-directed RNA polymerase II subunit RPB1"
FT                   /id="PRO_0000073935"
FT   REPEAT          1593..1599
FT                   /note="1"
FT   REPEAT          1600..1606
FT                   /note="2"
FT   REPEAT          1616..1622
FT                   /note="3"
FT   REPEAT          1623..1629
FT                   /note="4"
FT   REPEAT          1630..1636
FT                   /note="5"
FT   REPEAT          1637..1643
FT                   /note="6"
FT   REPEAT          1644..1650
FT                   /note="7"
FT   REPEAT          1651..1657
FT                   /note="8"
FT   REPEAT          1658..1664
FT                   /note="9"
FT   REPEAT          1665..1671
FT                   /note="10"
FT   REPEAT          1672..1678
FT                   /note="11"
FT   REPEAT          1679..1685
FT                   /note="12"
FT   REPEAT          1686..1692
FT                   /note="13"
FT   REPEAT          1693..1699
FT                   /note="14"
FT   REPEAT          1700..1706
FT                   /note="15"
FT   REPEAT          1707..1713
FT                   /note="16"
FT   REPEAT          1720..1726
FT                   /note="17"
FT   REPEAT          1727..1733
FT                   /note="18"
FT   REPEAT          1734..1740
FT                   /note="19"
FT   REPEAT          1741..1747
FT                   /note="20"
FT   REPEAT          1748..1754
FT                   /note="21"
FT   REPEAT          1755..1761
FT                   /note="22"
FT   REPEAT          1769..1775
FT                   /note="23"
FT   REPEAT          1782..1788
FT                   /note="24"
FT   REPEAT          1789..1795
FT                   /note="25"
FT   REPEAT          1796..1802
FT                   /note="26"
FT   REPEAT          1803..1809
FT                   /note="27"
FT   REPEAT          1810..1816
FT                   /note="28; approximate"
FT   REGION          256..268
FT                   /note="Lid loop"
FT   REGION          314..331
FT                   /note="Rudder loop"
FT   REGION          827..839
FT                   /note="Bridging helix"
FT   REGION          1523..1856
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1593..1816
FT                   /note="C-terminal domain (CTD); 28 X 7 AA approximate
FT                   tandem repeats of Y-[ST]-P-[ST]-S-P-[AGKNQRST]"
FT   COMPBIAS        1575..1804
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1813..1856
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   BINDING         66
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000250"
FT   BINDING         69
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000250"
FT   BINDING         76
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000250"
FT   BINDING         79
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000250"
FT   BINDING         106
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000250"
FT   BINDING         109
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000250"
FT   BINDING         149
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000250"
FT   BINDING         177
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000250"
FT   BINDING         489
FT                   /ligand="Mg(2+)"
FT                   /ligand_id="ChEBI:CHEBI:18420"
FT                   /ligand_label="1"
FT                   /ligand_note="catalytic"
FT                   /evidence="ECO:0000250"
FT   BINDING         489
FT                   /ligand="Mg(2+)"
FT                   /ligand_id="ChEBI:CHEBI:18420"
FT                   /ligand_label="2"
FT                   /ligand_note="ligand shared with RPB2"
FT                   /evidence="ECO:0000250"
FT   BINDING         491
FT                   /ligand="Mg(2+)"
FT                   /ligand_id="ChEBI:CHEBI:18420"
FT                   /ligand_label="1"
FT                   /ligand_note="catalytic"
FT                   /evidence="ECO:0000250"
FT   BINDING         491
FT                   /ligand="Mg(2+)"
FT                   /ligand_id="ChEBI:CHEBI:18420"
FT                   /ligand_label="2"
FT                   /ligand_note="ligand shared with RPB2"
FT                   /evidence="ECO:0000250"
FT   BINDING         493
FT                   /ligand="Mg(2+)"
FT                   /ligand_id="ChEBI:CHEBI:18420"
FT                   /ligand_label="1"
FT                   /ligand_note="catalytic"
FT                   /evidence="ECO:0000250"
FT   CONFLICT        215
FT                   /note="V -> D (in Ref. 1; AAA28126)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        412..415
FT                   /note="Missing (in Ref. 1; AAA28126)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        915
FT                   /note="R -> RVSVAQNAIKL (in Ref. 1; AAA28126)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        963
FT                   /note="I -> D (in Ref. 1; AAA28126)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        978
FT                   /note="Q -> L (in Ref. 1; AAA28126)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        994..995
FT                   /note="KP -> NA (in Ref. 1; AAA28126)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        1160..1162
FT                   /note="Missing (in Ref. 1; AAA28126)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        1406..1407
FT                   /note="IT -> YS (in Ref. 1; AAA28126)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   1856 AA;  204525 MW;  379BB183B957D2D5 CRC64;
     MALVGVDFQA PLRIVSRVQF GILGPEEIKR MSVAHVEFPE VYENGKPKLG GLMDPRQGVI
     DRRGRCMTCA GNLTDCPGHF GHLELAKPVF HIGFLTKTLK ILRCVCFYCG RLLIDKSAPR
     VLEILKKTGT NSKKRLTMIY DLCKAKSVCE GAAEKEEGMP DDPDDPMNDG KKVAGGCGRY
     QPSYRRVGID INAEWKKNVN EDTQERKIML TAERVLEVFQ QITDEDILVI GMDPQFARPE
     WMICTVLPVP PLAVRPAVVT FGSAKNQDDL THKLSDIIKT NQQLQRNEAN GAAAHVLTDD
     VRLLQFHVAT LVDNCIPGLP TATQKGGRPL KSIKQRLKGK EGRIRGNLMG KRVDFSARTV
     ITADPNLPID TVGVPRTIAQ NLTFPEIVTP FNVDKLQELV NRGDTQYPGA KYIIRENGAR
     VDLRYHPRAA DLHLQPGYRV ERHMKDGDII VFNRQPTLHK MSMMGHRVKI LPWSTFRMNL
     SVTSPYNADF DGDEMNLHLP QSLETRAEIE EIAMVPRQLI TPQANKPVMG IVQDTLCAVR
     MMTKRDVFID WPFMMDLLMY LPTWDGKVPQ PAILKPKPLW TGKQVFSLII PGNVNVLRTH
     STHPDSEDSG PYKWISPGDT KVIIEHGELL SGIVCSKTVG KSAGNLLHVV TLELGYEIAA
     NFYSHIQTVI NAWLIREGHT IGIGDTIADQ ATYLDIQNTI RKAKQDVVDV IEKAHNDDLE
     PTPGNTLRQT FENKVNQILN DARDRTGSSA QKSLSEFNNF KSMVVSGSKG SKINISQVIA
     CVGQQNVEGK RIPFGFRHRT LPHFIKDDYG PESKGFVENS YLAGLTPSEF FFHAMGGREG
     LIDTAVKTAE TGYIQRRLIK AMESVMVNYD GTVRNSLAQM VQLRYGEDGL DGMWVENQNM
     PTMKPNNAVF ERDFRMDLTD NKFLRKNYSE DVVREIQESE DGISLVESEW SQLEEDRRLL
     RKIFPRGDAK IVLPCNLQRL IWNAQKIFKV DLRKPVNLSP LHVISGVREL SKKLIIVSGN
     DEISKQAQYN ATLLMNILLR STLCTKNMCT KSKLNSEAFD WLLGEIESRF QQAIAQPGEM
     VGALAAQSLG EPATQMTLNT FHYAGVSAKN VTLGVPRLKE IINVSKTLKT PSLTVFLTGA
     AAKDPEKAKD VLCKLEHTTL KKVTCNTAIY YDPDPKNTVI AEDEEWVSIF YEMPDHDLSR
     TSPWLLRIEL DRKRMVDKKL TMEMIADRIH GGFGNDVHTI YTDDNAEKLV FRLRIAGEDK
     GEAQEEQVDK MEDDVFLRCI EANMLSDLTL QGIPAISKVY MNQPNTDDKK RIIITPEGGF
     KSVADWILET DGTALLRVLS ERQIDPVRTT SNDICEIFEV LGIEAVRKAI EREMDNVISF
     DGSYVNYRHL ALLCDVMTAK GHLMAITRHG INRQEVGALM RCSFEETVDI LMEAAVHAEE
     DPVKGVSENI MLGQLARCGT GCFDLVLDVE KCKYGMEIPQ NVVMGGGFYG SFAGSPSNRE
     FSPAHSPWNS GVTPTYAGAA WSPTTGGMSP GAGFSPAGNT DGGASPFNEG GWSPASPGDP
     LGALSPRTPS YGGMSPGVYS PSSPQFSMTS PHYSPTSPSY SPTSPAAGQS PVSPSYSPTS
     PSYSPTSPSY SPTSPSYSPT SPSYSPTSPS YSPTSPSYSP SSPSYSPSSP SYSPSSPRYS
     PTSPTYSPTS PTYSPTSPTY SPTSPTYSPT SPSYESGGGY SPSSPKYSPS SPTYSPTSPS
     YSPTSPQYSP TSPQYSPSSP TYTPSSPTYN PTSPRGFSSP QYSPTSPTYS PTSPSYTPSS
     PQYSPTSPTY TPSPSEQPGT SAQYSPTSPT YSPSSPTYSP ASPSYSPSSP TYDPNS
 
 
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