RPB3_ASFK5
ID RPB3_ASFK5 Reviewed; 359 AA.
AC P0C9E8;
DT 05-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 05-MAY-2009, sequence version 1.
DT 03-AUG-2022, entry version 33.
DE RecName: Full=DNA-directed RNA polymerase RPB3-11 homolog {ECO:0000250|UniProtKB:Q65184};
DE Short=RPB3-11 homolog {ECO:0000305};
GN OrderedLocusNames=Ken-125;
OS African swine fever virus (isolate Pig/Kenya/KEN-50/1950) (ASFV).
OC Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes;
OC Asfuvirales; Asfarviridae; Asfivirus.
OX NCBI_TaxID=561445;
OH NCBI_TaxID=6937; Ornithodoros (relapsing fever ticks).
OH NCBI_TaxID=85517; Phacochoerus aethiopicus (Warthog).
OH NCBI_TaxID=41426; Phacochoerus africanus (Warthog).
OH NCBI_TaxID=273792; Potamochoerus larvatus (Bushpig).
OH NCBI_TaxID=9823; Sus scrofa (Pig).
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Kutish G.F., Rock D.L.;
RT "African swine fever virus genomes.";
RL Submitted (MAR-2003) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Component of the DNA-directed RNA polymerase (RNAP) that
CC catalyzes the transcription in the cytoplasm of viral DNA into RNA
CC using the four ribonucleoside triphosphates as substrates.
CC {ECO:0000250|UniProtKB:P19387}.
CC -!- SUBUNIT: Part of the viral DNA-directed RNA polymerase that consists of
CC 8 polII-like subunits (RPB1, RPB2, RPB3, RPB5, RPB6, RPB7, RPB9,
CC RPB10), a capping enzyme and a termination factor.
CC {ECO:0000250|UniProtKB:Q65184}.
CC -!- SUBCELLULAR LOCATION: Host cytoplasm {ECO:0000305}. Virion
CC {ECO:0000250|UniProtKB:Q65184}. Note=Found in association with viral
CC nucleoid. {ECO:0000250|UniProtKB:Q65184}.
CC -!- INDUCTION: Expressed in the early phase of the viral replicative cycle.
CC {ECO:0000250|UniProtKB:Q65184}.
CC -!- SIMILARITY: In the N-terminal section; belongs to the archaeal
CC RpoD/eukaryotic RPB3 RNA polymerase subunit family. {ECO:0000305}.
CC -!- SIMILARITY: In the C-terminal section; belongs to the archaeal
CC RpoL/eukaryotic RPB11/RPC19 RNA polymerase subunit family.
CC {ECO:0000305}.
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DR EMBL; AY261360; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR SMR; P0C9E8; -.
DR Proteomes; UP000000861; Genome.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0006351; P:transcription, DNA-templated; IEA:InterPro.
DR GO; GO:0019083; P:viral transcription; IEA:UniProtKB-KW.
DR Gene3D; 3.30.1360.10; -; 1.
DR InterPro; IPR036603; RBP11-like.
DR InterPro; IPR009025; RBP11-like_dimer.
DR InterPro; IPR036643; RNApol_insert_sf.
DR Pfam; PF13656; RNA_pol_L_2; 1.
DR SUPFAM; SSF55257; SSF55257; 1.
DR SUPFAM; SSF56553; SSF56553; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase; Early protein; Host cytoplasm; Transcription;
KW Viral transcription; Virion.
FT CHAIN 1..359
FT /note="DNA-directed RNA polymerase RPB3-11 homolog"
FT /id="PRO_0000373168"
SQ SEQUENCE 359 AA; 41449 MW; B1DA5C754BA00ED3 CRC64;
MEKIFQNVDI KPLLIDFSNP FIKNAAKKLF QLEEQLPLVP VNVMMDFKGI NRATVHGLSR
VLQDEIPNYM LDIKPGGYKI EDSTDLFMTE QFVRNRINFI PIYAENETLV FALRSLNNSC
EVKTIYSRDL IQVAGPKLKY PIFNPTFEIG FLQPGKSLII EDIYIKKGIG RKHAAFNLAV
KTHFSHLDIE QYPTDKKEYM ALSGYKQSSM TSDPRHHRLG LCFPAVPLPR INQVVRTYLK
NACRVIIGRI QNIQKIYENF EEPQPELVLF SMDEEKTKAI ITIKDETHTI GNLLKTCIYE
MIPDISFVGY QCIPHKQEMV LTIIHKASQE DLITLLEKSI QNIIQIFQTL EKNIDERIA