RPB3_ASFP4
ID RPB3_ASFP4 Reviewed; 359 AA.
AC P0C9E6;
DT 05-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 05-MAY-2009, sequence version 1.
DT 03-AUG-2022, entry version 40.
DE RecName: Full=DNA-directed RNA polymerase RPB3-11 homolog {ECO:0000250|UniProtKB:Q65184};
DE Short=RPB3-11 homolog {ECO:0000305};
GN OrderedLocusNames=Pret-125;
OS African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996)
OS (ASFV).
OC Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes;
OC Asfuvirales; Asfarviridae; Asfivirus.
OX NCBI_TaxID=561443;
OH NCBI_TaxID=6937; Ornithodoros (relapsing fever ticks).
OH NCBI_TaxID=85517; Phacochoerus aethiopicus (Warthog).
OH NCBI_TaxID=41426; Phacochoerus africanus (Warthog).
OH NCBI_TaxID=273792; Potamochoerus larvatus (Bushpig).
OH NCBI_TaxID=9823; Sus scrofa (Pig).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RA Kutish G.F., Rock D.L.;
RT "African swine fever virus genomes.";
RL Submitted (MAR-2003) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Component of the DNA-directed RNA polymerase (RNAP) that
CC catalyzes the transcription in the cytoplasm of viral DNA into RNA
CC using the four ribonucleoside triphosphates as substrates.
CC {ECO:0000250|UniProtKB:P19387}.
CC -!- SUBUNIT: Part of the viral DNA-directed RNA polymerase that consists of
CC 8 polII-like subunits (RPB1, RPB2, RPB3, RPB5, RPB6, RPB7, RPB9,
CC RPB10), a capping enzyme and a termination factor.
CC {ECO:0000250|UniProtKB:Q65184}.
CC -!- SUBCELLULAR LOCATION: Host cytoplasm {ECO:0000305}. Virion
CC {ECO:0000250|UniProtKB:Q65184}. Note=Found in association with viral
CC nucleoid. {ECO:0000250|UniProtKB:Q65184}.
CC -!- INDUCTION: Expressed in the early phase of the viral replicative cycle.
CC {ECO:0000305}.
CC -!- SIMILARITY: In the N-terminal section; belongs to the archaeal
CC RpoD/eukaryotic RPB3 RNA polymerase subunit family. {ECO:0000305}.
CC -!- SIMILARITY: In the C-terminal section; belongs to the archaeal
CC RpoL/eukaryotic RPB11/RPC19 RNA polymerase subunit family.
CC {ECO:0000305}.
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DR EMBL; AY261363; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR SMR; P0C9E6; -.
DR Proteomes; UP000000859; Genome.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0006351; P:transcription, DNA-templated; IEA:InterPro.
DR GO; GO:0019083; P:viral transcription; IEA:UniProtKB-KW.
DR Gene3D; 3.30.1360.10; -; 1.
DR InterPro; IPR036603; RBP11-like.
DR InterPro; IPR009025; RBP11-like_dimer.
DR InterPro; IPR036643; RNApol_insert_sf.
DR Pfam; PF13656; RNA_pol_L_2; 1.
DR SUPFAM; SSF55257; SSF55257; 1.
DR SUPFAM; SSF56553; SSF56553; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase; Early protein; Host cytoplasm; Transcription;
KW Viral transcription; Virion.
FT CHAIN 1..359
FT /note="DNA-directed RNA polymerase RPB3-11 homolog"
FT /id="PRO_0000373166"
SQ SEQUENCE 359 AA; 41419 MW; 0BA567104C9C6D73 CRC64;
MEKIFQNVEI KPFLIDFSNP FIKNAAKRLF QLEEQLPLVP VNVVMDFKGI NRAAVHGLSR
VLQDEIPNYM LDIKPGGYKI EDSTDLFMTE QFIRNRINFI PIYAKNETLV FALRSLNNSC
EVKTIYSRDL IQVAGPKLKY PIFNPTFEIG FLQPGKSLII EDIYIKRGIG RKHAAFNLAV
KTHFSHLDIE QYPTDKKEYM ALSGYKQSSM TSDPRHHRLG LCFPAVPLPH INQAVRTYLK
NACRVIIGRI QSIQKIYENF EEPQPELVLF SMDEEKTKAI ITIKDETHTI GNLLKTYIYE
MIPDISFVGY QCVPHKQEMV LTIIHKASQE DLITLLEKSI QNIIQTFQIL EKNVDELIA