RPB5_ASFM2
ID RPB5_ASFM2 Reviewed; 205 AA.
AC Q65224;
DT 05-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1996, sequence version 1.
DT 03-AUG-2022, entry version 80.
DE RecName: Full=DNA-directed RNA polymerase RPB5 homolog {ECO:0000250|UniProtKB:Q65181};
DE Short=RPB5 homolog {ECO:0000305};
GN OrderedLocusNames=Mal-116; ORFNames=i2R;
OS African swine fever virus (isolate Tick/Malawi/Lil 20-1/1983) (ASFV).
OC Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes;
OC Asfuvirales; Asfarviridae; Asfivirus.
OX NCBI_TaxID=10500;
OH NCBI_TaxID=6937; Ornithodoros (relapsing fever ticks).
OH NCBI_TaxID=85517; Phacochoerus aethiopicus (Warthog).
OH NCBI_TaxID=41426; Phacochoerus africanus (Warthog).
OH NCBI_TaxID=273792; Potamochoerus larvatus (Bushpig).
OH NCBI_TaxID=9823; Sus scrofa (Pig).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=8021596; DOI=10.1099/0022-1317-75-7-1655;
RA Dixon L.K., Twigg S.R.F., Baylis S.A., Vydelingum S., Bristow C.,
RA Hammond J.M., Smith G.L.;
RT "Nucleotide sequence of a 55 kbp region from the right end of the genome of
RT a pathogenic African swine fever virus isolate (Malawi LIL20/1).";
RL J. Gen. Virol. 75:1655-1684(1994).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Kutish G.F., Rock D.L.;
RT "African swine fever virus genomes.";
RL Submitted (MAR-2003) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Component of the DNA-directed RNA polymerase (RNAP) that
CC catalyzes the transcription in the cytoplasm of viral DNA into RNA
CC using the four ribonucleoside triphosphates as substrates.
CC {ECO:0000250|UniProtKB:P19388}.
CC -!- SUBUNIT: Part of the viral DNA-directed RNA polymerase that consists of
CC 8 polII-like subunits (RPB1, RPB2, RPB3, RPB5, RPB6, RPB7, RPB9,
CC RPB10), a capping enzyme and a termination factor.
CC {ECO:0000250|UniProtKB:Q65181}.
CC -!- SUBCELLULAR LOCATION: Host cytoplasm {ECO:0000305}. Virion
CC {ECO:0000250|UniProtKB:Q65181}. Note=Found in association with viral
CC nucleoid. {ECO:0000250|UniProtKB:Q65181}.
CC -!- SIMILARITY: Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase
CC subunit family. {ECO:0000305}.
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DR EMBL; X71982; CAA50815.1; -; Genomic_DNA.
DR EMBL; AY261361; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR SMR; Q65224; -.
DR Proteomes; UP000000860; Genome.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:InterPro.
DR GO; GO:0006351; P:transcription, DNA-templated; IEA:InterPro.
DR GO; GO:0019083; P:viral transcription; IEA:UniProtKB-KW.
DR Gene3D; 3.90.940.20; -; 1.
DR InterPro; IPR000783; RNA_pol_subH/Rpb5_C.
DR InterPro; IPR035913; RPB5-like_sf.
DR Pfam; PF01191; RNA_pol_Rpb5_C; 1.
DR SUPFAM; SSF55287; SSF55287; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase; Host cytoplasm; Transcription;
KW Viral transcription; Virion.
FT CHAIN 1..205
FT /note="DNA-directed RNA polymerase RPB5 homolog"
FT /id="PRO_0000373124"
SQ SEQUENCE 205 AA; 23659 MW; DBB93D1EA81EBF45 CRC64;
MAMQKLFTYI YEFIEYRKMV LLEEKVPYDK FVQMVFNTGF FRINAETLNH GIVSVFIFGA
NGKYVHHGGD MRTLLTNTLN EKKQYEELIL IVDKPILGKK NILDIIVEQR AANPTVVINI
YPYHLFCINI PKVSAIPKHK LITQEEAQEF LGREYLQPQD LMQISASDPP VVWLGGRPGD
FVQIERPSET AMHAVVIRFI TKSKI