RPC3_AJECN
ID RPC3_AJECN Reviewed; 649 AA.
AC A6R9K6;
DT 23-SEP-2008, integrated into UniProtKB/Swiss-Prot.
DT 21-AUG-2007, sequence version 1.
DT 03-AUG-2022, entry version 60.
DE RecName: Full=DNA-directed RNA polymerase III subunit rpc3;
DE Short=RNA polymerase III subunit C3;
GN Name=RPC82; Synonyms=RPC3; ORFNames=HCAG_06997;
OS Ajellomyces capsulatus (strain NAm1 / WU24) (Darling's disease fungus)
OS (Histoplasma capsulatum).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Eurotiomycetidae; Onygenales; Ajellomycetaceae; Histoplasma;
OC unclassified Histoplasma.
OX NCBI_TaxID=2059318;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NAm1 / WU24;
RX PubMed=19717792; DOI=10.1101/gr.087551.108;
RA Sharpton T.J., Stajich J.E., Rounsley S.D., Gardner M.J., Wortman J.R.,
RA Jordar V.S., Maiti R., Kodira C.D., Neafsey D.E., Zeng Q., Hung C.-Y.,
RA McMahan C., Muszewska A., Grynberg M., Mandel M.A., Kellner E.M.,
RA Barker B.M., Galgiani J.N., Orbach M.J., Kirkland T.N., Cole G.T.,
RA Henn M.R., Birren B.W., Taylor J.W.;
RT "Comparative genomic analyses of the human fungal pathogens Coccidioides
RT and their relatives.";
RL Genome Res. 19:1722-1731(2009).
CC -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of
CC DNA into RNA using the four ribonucleoside triphosphates as substrates.
CC Specific core component of RNA polymerase III which synthesizes small
CC RNAs, such as 5S rRNA and tRNAs (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Component of the RNA polymerase III (Pol III) complex
CC consisting of 17 subunits. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the RNA polymerase beta chain family.
CC {ECO:0000305}.
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DR EMBL; CH476660; EDN09830.1; -; Genomic_DNA.
DR RefSeq; XP_001539392.1; XM_001539342.1.
DR AlphaFoldDB; A6R9K6; -.
DR SMR; A6R9K6; -.
DR STRING; 339724.A6R9K6; -.
DR EnsemblFungi; EDN09830; EDN09830; HCAG_06997.
DR GeneID; 5445702; -.
DR KEGG; aje:HCAG_06997; -.
DR VEuPathDB; FungiDB:HCAG_06997; -.
DR HOGENOM; CLU_023294_0_0_1; -.
DR OMA; QLKMVNE; -.
DR OrthoDB; 809282at2759; -.
DR Proteomes; UP000009297; Unassembled WGS sequence.
DR GO; GO:0005666; C:RNA polymerase III complex; IEA:InterPro.
DR GO; GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
DR GO; GO:0006351; P:transcription, DNA-templated; IEA:InterPro.
DR Gene3D; 1.10.10.10; -; 2.
DR InterPro; IPR013197; RNA_pol_III_RPC82-rel_HTH.
DR InterPro; IPR008806; RNA_pol_III_Rpc82_C.
DR InterPro; IPR039748; RPC3.
DR InterPro; IPR024550; TFIIEa/SarR/Rpc3_HTH_dom.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR12949; PTHR12949; 1.
DR Pfam; PF08221; HTH_9; 1.
DR Pfam; PF05645; RNA_pol_Rpc82; 1.
DR Pfam; PF02002; TFIIE_alpha; 1.
DR SUPFAM; SSF46785; SSF46785; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase; Nucleus; Reference proteome; Transcription;
KW Zinc.
FT CHAIN 1..649
FT /note="DNA-directed RNA polymerase III subunit rpc3"
FT /id="PRO_0000351021"
FT REGION 135..176
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 266..293
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 409..432
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 576..597
FT /note="Leucine-zipper"
FT COMPBIAS 152..169
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 649 AA; 73570 MW; 9B1A4B9A37563CFB CRC64;
MSQYAAELCK LLITDNFGEL YAPLPRIVQN TRLSPRQVRH GLAVLIQQRL IYHYTSLDDG
IAYYEASWMT AYNLVRSGRI LQLVEEKLGK YVAKVLSTIL YHGHVRISYL ETLPELRPQV
SSKAGKLVAA NGLNGIHSDE EEEEEDAHVT DQGEQEEYAS GRPENSVDSD YGKRSASQLH
PALRSLAAYG YIMRVRDAHF QSPADLVEDA ERAVSSRSDV RGLKGKKFQE AIDAGVETYI
KEKTDGTIPQ GPLAGALPRG IKRRAGQLAT NSSSKRVKLE HLPEGDEDID DDDFYGDDYV
DGDNTLMDPN MIISVNYQKF EVALRNRRLA RLAEQCTSRV TSQVYEALLG RIELKTPACR
KQPERVPEGE ENEQYSVAIP LHTILDDIDP DLDLSESMAG VDPANLLSNG HMGLNGDGNG
DDDDDESTGA STGIWNRRRN RVYELEQHLS LLAQEPNIFS TRSMQSGMIT WAVEFRHLAR
RLRHLEIERI IESRFGTIAV RVIRVLAAKG KLDEKRLQEI SLMASKELRQ VLARMEAAGF
VDLQEVPRDA QRQPSRTMYL WFFDLDRVAR MVLEDTYKCM SRCLQRIGVE RNKLKLFLEK
TERTDVKGNE EKYLSPAELK TLKEWRDKEA LLLGEVGRLD ELVSVLRDY