RPC3_COCIM
ID RPC3_COCIM Reviewed; 653 AA.
AC Q1DTR6; J3K8E2;
DT 23-SEP-2008, integrated into UniProtKB/Swiss-Prot.
DT 11-JUL-2006, sequence version 1.
DT 03-AUG-2022, entry version 70.
DE RecName: Full=DNA-directed RNA polymerase III subunit RPC-3;
DE Short=RNA polymerase III subunit C3;
GN Name=RPC-82; Synonyms=RPC-3; ORFNames=CIMG_06297;
OS Coccidioides immitis (strain RS) (Valley fever fungus).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Eurotiomycetidae; Onygenales; Onygenaceae; Coccidioides.
OX NCBI_TaxID=246410;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RS;
RX PubMed=19717792; DOI=10.1101/gr.087551.108;
RA Sharpton T.J., Stajich J.E., Rounsley S.D., Gardner M.J., Wortman J.R.,
RA Jordar V.S., Maiti R., Kodira C.D., Neafsey D.E., Zeng Q., Hung C.-Y.,
RA McMahan C., Muszewska A., Grynberg M., Mandel M.A., Kellner E.M.,
RA Barker B.M., Galgiani J.N., Orbach M.J., Kirkland T.N., Cole G.T.,
RA Henn M.R., Birren B.W., Taylor J.W.;
RT "Comparative genomic analyses of the human fungal pathogens Coccidioides
RT and their relatives.";
RL Genome Res. 19:1722-1731(2009).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=RS;
RX PubMed=20516208; DOI=10.1101/gr.103911.109;
RA Neafsey D.E., Barker B.M., Sharpton T.J., Stajich J.E., Park D.J.,
RA Whiston E., Hung C.-Y., McMahan C., White J., Sykes S., Heiman D.,
RA Young S., Zeng Q., Abouelleil A., Aftuck L., Bessette D., Brown A.,
RA FitzGerald M., Lui A., Macdonald J.P., Priest M., Orbach M.J.,
RA Galgiani J.N., Kirkland T.N., Cole G.T., Birren B.W., Henn M.R.,
RA Taylor J.W., Rounsley S.D.;
RT "Population genomic sequencing of Coccidioides fungi reveals recent
RT hybridization and transposon control.";
RL Genome Res. 20:938-946(2010).
CC -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of
CC DNA into RNA using the four ribonucleoside triphosphates as substrates.
CC Specific core component of RNA polymerase III which synthesizes small
CC RNAs, such as 5S rRNA and tRNAs (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Component of the RNA polymerase III (Pol III) complex
CC consisting of 17 subunits. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the RNA polymerase beta chain family.
CC {ECO:0000305}.
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DR EMBL; GG704912; EAS30818.3; -; Genomic_DNA.
DR RefSeq; XP_001242401.1; XM_001242400.2.
DR AlphaFoldDB; Q1DTR6; -.
DR SMR; Q1DTR6; -.
DR STRING; 246410.Q1DTR6; -.
DR EnsemblFungi; EAS30818; EAS30818; CIMG_06297.
DR GeneID; 4561612; -.
DR KEGG; cim:CIMG_06297; -.
DR VEuPathDB; FungiDB:CIMG_06297; -.
DR InParanoid; Q1DTR6; -.
DR OMA; QLKMVNE; -.
DR OrthoDB; 809282at2759; -.
DR Proteomes; UP000001261; Unassembled WGS sequence.
DR GO; GO:0005666; C:RNA polymerase III complex; IEA:InterPro.
DR GO; GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
DR GO; GO:0006351; P:transcription, DNA-templated; IEA:InterPro.
DR Gene3D; 1.10.10.10; -; 2.
DR InterPro; IPR013197; RNA_pol_III_RPC82-rel_HTH.
DR InterPro; IPR008806; RNA_pol_III_Rpc82_C.
DR InterPro; IPR039748; RPC3.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR12949; PTHR12949; 1.
DR Pfam; PF08221; HTH_9; 1.
DR Pfam; PF05645; RNA_pol_Rpc82; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase; Nucleus; Reference proteome; Transcription;
KW Zinc.
FT CHAIN 1..653
FT /note="DNA-directed RNA polymerase III subunit RPC-3"
FT /id="PRO_0000351032"
FT REGION 141..186
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 280..309
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 422..442
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 580..601
FT /note="Leucine-zipper"
FT COMPBIAS 151..172
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 280..295
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 653 AA; 74226 MW; C67E758998504669 CRC64;
MSQYAAELCK LLITDNFGEL YALIFIYLLN HGRQPLPRIV QNTHLSPRQV RHGLAVLVQQ
HLVFHCTSLD DGITYYESNW RSAYNLVRSG KIIQLVEERL GNRAASIVST LLALGHAKIS
YLESLPELQP GHERPVKANG INGVHGGEGE DVNGVDNDAE NHTDHAHDYQ QDGPVREPNG
YHDSDPGLQV QTILQQLAAF GFITRVRNQH FQSPEDNFDA ALKAAKSNGD SYGLKGNKLE
AKLTEDAEKL VKEWTDGRIS RALPSASLLR GVKRRLRKDD SSAPRKRLKL DGPLEDDVKD
EDDGDDFSDD DYHNDEMAAL DPNMVIRVNY EKFNVALRNR RLIELADQNG SAVTSQVYET
LLSHIEVQTP TCREHVEAIP EGEEAEQYSV SIRLDTISRD LDIDLDLAGV IAGIIPDNIN
GIKEDEDDED EEGGPVSMKR RGPSRNYLVD QHLSFLAAEP SFFCTRRMQA GMITWAVEYR
HLAKKLRHLE LERLIEARFG GFAVRIVRVL AAKGKLDEKR LQEISLMASK DLRQILGQMA
SAGFVELQEV PRDAQRQPSR TMYLWFYDPD RVRFMVIEDT YKSMSRCLQR IRVEREKLKF
LLEKTERSDV KGNEDRYLSA AELQTLKEWR DTEKLLLGEV ARLDELVAVL RDY