RPC3_YARLI
ID RPC3_YARLI Reviewed; 599 AA.
AC Q6C2E2;
DT 23-SEP-2008, integrated into UniProtKB/Swiss-Prot.
DT 16-AUG-2004, sequence version 1.
DT 03-AUG-2022, entry version 86.
DE RecName: Full=DNA-directed RNA polymerase III subunit RPC3;
DE Short=RNA polymerase III subunit C3;
DE AltName: Full=C82;
GN Name=RPC82; Synonyms=RPC3; OrderedLocusNames=YALI0F08635g;
OS Yarrowia lipolytica (strain CLIB 122 / E 150) (Yeast) (Candida lipolytica).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Dipodascaceae; Yarrowia.
OX NCBI_TaxID=284591;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CLIB 122 / E 150;
RX PubMed=15229592; DOI=10.1038/nature02579;
RA Dujon B., Sherman D., Fischer G., Durrens P., Casaregola S., Lafontaine I.,
RA de Montigny J., Marck C., Neuveglise C., Talla E., Goffard N., Frangeul L.,
RA Aigle M., Anthouard V., Babour A., Barbe V., Barnay S., Blanchin S.,
RA Beckerich J.-M., Beyne E., Bleykasten C., Boisrame A., Boyer J.,
RA Cattolico L., Confanioleri F., de Daruvar A., Despons L., Fabre E.,
RA Fairhead C., Ferry-Dumazet H., Groppi A., Hantraye F., Hennequin C.,
RA Jauniaux N., Joyet P., Kachouri R., Kerrest A., Koszul R., Lemaire M.,
RA Lesur I., Ma L., Muller H., Nicaud J.-M., Nikolski M., Oztas S.,
RA Ozier-Kalogeropoulos O., Pellenz S., Potier S., Richard G.-F.,
RA Straub M.-L., Suleau A., Swennen D., Tekaia F., Wesolowski-Louvel M.,
RA Westhof E., Wirth B., Zeniou-Meyer M., Zivanovic Y., Bolotin-Fukuhara M.,
RA Thierry A., Bouchier C., Caudron B., Scarpelli C., Gaillardin C.,
RA Weissenbach J., Wincker P., Souciet J.-L.;
RT "Genome evolution in yeasts.";
RL Nature 430:35-44(2004).
CC -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of
CC DNA into RNA using the four ribonucleoside triphosphates as substrates.
CC Specific core component of RNA polymerase III which synthesizes small
CC RNAs, such as 5S rRNA and tRNAs (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Component of the RNA polymerase III (Pol III) complex
CC consisting of 17 subunits. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the RNA polymerase beta chain family.
CC {ECO:0000305}.
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DR EMBL; CR382132; CAG77977.1; -; Genomic_DNA.
DR RefSeq; XP_505170.1; XM_505170.1.
DR AlphaFoldDB; Q6C2E2; -.
DR SMR; Q6C2E2; -.
DR STRING; 4952.CAG77977; -.
DR EnsemblFungi; CAG77977; CAG77977; YALI0_F08635g.
DR GeneID; 2908482; -.
DR KEGG; yli:YALI0F08635g; -.
DR VEuPathDB; FungiDB:YALI0_F08635g; -.
DR HOGENOM; CLU_023294_0_0_1; -.
DR InParanoid; Q6C2E2; -.
DR OMA; QLKMVNE; -.
DR Proteomes; UP000001300; Chromosome F.
DR GO; GO:0005666; C:RNA polymerase III complex; IBA:GO_Central.
DR GO; GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
DR GO; GO:0006351; P:transcription, DNA-templated; IEA:InterPro.
DR Gene3D; 1.10.10.10; -; 3.
DR InterPro; IPR013197; RNA_pol_III_RPC82-rel_HTH.
DR InterPro; IPR008806; RNA_pol_III_Rpc82_C.
DR InterPro; IPR039748; RPC3.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR12949; PTHR12949; 1.
DR Pfam; PF08221; HTH_9; 1.
DR Pfam; PF05645; RNA_pol_Rpc82; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase; Nucleus; Reference proteome; Transcription;
KW Zinc.
FT CHAIN 1..599
FT /note="DNA-directed RNA polymerase III subunit RPC3"
FT /id="PRO_0000351042"
FT REGION 335..371
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 526..547
FT /note="Leucine-zipper"
FT COMPBIAS 355..371
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 599 AA; 67329 MW; A61A9BB849ADEC8B CRC64;
MSELHNPDQS SRALFDLCRV LLKGIYGELS AVLVGSLLDY GRQTAAELAK TTKLPLSAVH
SGLAALVQNR FVLYWANDRK SGRDTDDIGE SSSIHYVANW KEIYQVVRAG GMVDAVRKDF
GKGPGGKSNP ESGERCAEIA QNLLVYGHMR VADYLEATPE HDRDSVEASI AVMLRKRFLV
PVQAWQFKPE TDLYARMFRD HLSKLPLSMA ESARKNQAAV SAKTELERMQ EERNSLNLGF
VSGSVARTKG VPVLNRAEKL DHQAVLCANP DKFLVIARNE ELAKLAEERC GKTAAEVYRQ
CLSKYVGRLH SCTQDTSPGA EFNITSMEIA KTIDPRLDGL RPRGKGSRSV SPRPQSKRVK
TEEGYTKTGD YDEKEVDVEE DMEEELSGVA LATAVSKQMQ ILAASPLKFV QSVGTKGGGE
WYVNFKEATE CLRGARYEQI IQWKYGRVAK RLLRAVKDKG KVDEKLLTNI ALLPVKEILN
HLHDLHSVGA LDVQELPRTA DRAASRTIFL WHHRANRAYS LISQDIYKSL SRCFERVAAE
RAKLPILLSK LQREDVKGHE DEFLTEQEKA DLKGLRMREE KLLVQMNRLD GLIRVFRDY