RPE_RHORU
ID RPE_RHORU Reviewed; 225 AA.
AC P51013;
DT 01-OCT-1996, integrated into UniProtKB/Swiss-Prot.
DT 15-JUL-1998, sequence version 2.
DT 03-AUG-2022, entry version 77.
DE RecName: Full=Ribulose-phosphate 3-epimerase {ECO:0000255|HAMAP-Rule:MF_02227};
DE EC=5.1.3.1 {ECO:0000255|HAMAP-Rule:MF_02227};
GN Name=rpe {ECO:0000255|HAMAP-Rule:MF_02227}; Synonyms=cbbE;
OS Rhodospirillum rubrum.
OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales;
OC Rhodospirillaceae; Rhodospirillum.
OX NCBI_TaxID=1085;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=STR-2;
RX PubMed=8349547; DOI=10.1128/jb.175.16.5066-5077.1993;
RA Falcone D.L., Tabita F.R.;
RT "Complementation analysis and regulation of CO2 fixation gene expression in
RT a ribulose 1,5-bisphosphate carboxylase-oxygenase deletion strain of
RT Rhodospirillum rubrum.";
RL J. Bacteriol. 175:5066-5077(1993).
RN [2]
RP CONCEPTUAL TRANSLATION.
RX PubMed=8616224; DOI=10.1007/bf00020468;
RA Nowitzki U., Wyrich R., Westhoff P., Henze K., Schnarrenberger C.,
RA Martin W.F.;
RT "Cloning of the amphibolic Calvin cycle/OPPP enzyme D-ribulose-5-phosphate
RT 3-epimerase (EC 5.1.3.1) from spinach chloroplasts: functional and
RT evolutionary aspects.";
RL Plant Mol. Biol. 29:1279-1291(1995).
CC -!- FUNCTION: Catalyzes the reversible epimerization of D-ribulose 5-
CC phosphate to D-xylulose 5-phosphate. {ECO:0000255|HAMAP-Rule:MF_02227}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=D-ribulose 5-phosphate = D-xylulose 5-phosphate;
CC Xref=Rhea:RHEA:13677, ChEBI:CHEBI:57737, ChEBI:CHEBI:58121;
CC EC=5.1.3.1; Evidence={ECO:0000255|HAMAP-Rule:MF_02227};
CC -!- COFACTOR:
CC Name=a divalent metal cation; Xref=ChEBI:CHEBI:60240;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_02227};
CC Note=Binds 1 divalent metal cation per subunit. {ECO:0000255|HAMAP-
CC Rule:MF_02227};
CC -!- PATHWAY: Carbohydrate degradation. {ECO:0000255|HAMAP-Rule:MF_02227}.
CC -!- SIMILARITY: Belongs to the ribulose-phosphate 3-epimerase family.
CC {ECO:0000255|HAMAP-Rule:MF_02227}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAB27778.1; Type=Frameshift; Evidence={ECO:0000305};
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DR EMBL; S64484; AAB27778.1; ALT_FRAME; Genomic_DNA.
DR PIR; A53305; A53305.
DR AlphaFoldDB; P51013; -.
DR SMR; P51013; -.
DR PRIDE; P51013; -.
DR GO; GO:0004750; F:D-ribulose-phosphate 3-epimerase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-UniRule.
DR GO; GO:0019323; P:pentose catabolic process; IEA:UniProtKB-UniRule.
DR GO; GO:0006098; P:pentose-phosphate shunt; IEA:InterPro.
DR GO; GO:0019253; P:reductive pentose-phosphate cycle; IEA:UniProtKB-KW.
DR CDD; cd00429; RPE; 1.
DR Gene3D; 3.20.20.70; -; 1.
DR HAMAP; MF_02227; RPE; 1.
DR InterPro; IPR013785; Aldolase_TIM.
DR InterPro; IPR026019; Ribul_P_3_epim.
DR InterPro; IPR000056; Ribul_P_3_epim-like.
DR InterPro; IPR011060; RibuloseP-bd_barrel.
DR PANTHER; PTHR11749; PTHR11749; 1.
DR Pfam; PF00834; Ribul_P_3_epim; 1.
DR PIRSF; PIRSF001461; RPE; 1.
DR SUPFAM; SSF51366; SSF51366; 1.
DR TIGRFAMs; TIGR01163; rpe; 1.
DR PROSITE; PS01085; RIBUL_P_3_EPIMER_1; 1.
DR PROSITE; PS01086; RIBUL_P_3_EPIMER_2; 1.
PE 3: Inferred from homology;
KW Calvin cycle; Carbohydrate metabolism; Isomerase; Metal-binding.
FT CHAIN 1..225
FT /note="Ribulose-phosphate 3-epimerase"
FT /id="PRO_0000171559"
FT ACT_SITE 37
FT /note="Proton acceptor"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_02227"
FT ACT_SITE 175
FT /note="Proton donor"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_02227"
FT BINDING 10
FT /ligand="substrate"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_02227"
FT BINDING 35
FT /ligand="a divalent metal cation"
FT /ligand_id="ChEBI:CHEBI:60240"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_02227"
FT BINDING 37
FT /ligand="a divalent metal cation"
FT /ligand_id="ChEBI:CHEBI:60240"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_02227"
FT BINDING 68
FT /ligand="a divalent metal cation"
FT /ligand_id="ChEBI:CHEBI:60240"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_02227"
FT BINDING 68
FT /ligand="substrate"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_02227"
FT BINDING 144..147
FT /ligand="substrate"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_02227"
FT BINDING 175..177
FT /ligand="substrate"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_02227"
FT BINDING 175
FT /ligand="a divalent metal cation"
FT /ligand_id="ChEBI:CHEBI:60240"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_02227"
SQ SEQUENCE 225 AA; 23765 MW; 143D9631241F0E3C CRC64;
MTRAIRIAPS LLSADFAISR PRCPSDGRTG ADILHFDVMD NHYVPNLTVG PLVCAALRPH
TSLPIDVHLM TRPVDPLIDS FAEAGADMIT FHPEASDHVH RSVQMIRKRG LKAGVALNPA
SPLSLLDHIL EDLDLVLIMS VNPGFGGQSF IPSALPKIAA LANGRRRACR GDRVDGGVNP
ADARALARPG ADILVRLAIF GASDRAKAIA SIRGAAESGL GQEAA