RPIB_MYCPA
ID RPIB_MYCPA Reviewed; 159 AA.
AC Q73XM4;
DT 03-OCT-2006, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 93.
DE RecName: Full=Ribose-5-phosphate isomerase B {ECO:0000250|UniProtKB:P9WKD7};
DE EC=5.3.1.6 {ECO:0000250|UniProtKB:P9WKD7};
DE AltName: Full=Phosphoriboisomerase B {ECO:0000250|UniProtKB:P9WKD7};
GN Name=rpiB {ECO:0000250|UniProtKB:P9WKD7}; Synonyms=rpi;
GN OrderedLocusNames=MAP_2285c;
OS Mycolicibacterium paratuberculosis (strain ATCC BAA-968 / K-10)
OS (Mycobacterium paratuberculosis).
OC Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
OC Mycobacterium; Mycobacterium avium complex (MAC).
OX NCBI_TaxID=262316;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-968 / K-10;
RX PubMed=16116077; DOI=10.1073/pnas.0505662102;
RA Li L., Bannantine J.P., Zhang Q., Amonsin A., May B.J., Alt D., Banerji N.,
RA Kanjilal S., Kapur V.;
RT "The complete genome sequence of Mycobacterium avium subspecies
RT paratuberculosis.";
RL Proc. Natl. Acad. Sci. U.S.A. 102:12344-12349(2005).
CC -!- FUNCTION: Catalyzes the interconversion of ribulose-5-P and ribose-5-P.
CC {ECO:0000250|UniProtKB:P9WKD7}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=aldehydo-D-ribose 5-phosphate = D-ribulose 5-phosphate;
CC Xref=Rhea:RHEA:14657, ChEBI:CHEBI:58121, ChEBI:CHEBI:58273;
CC EC=5.3.1.6; Evidence={ECO:0000250|UniProtKB:P9WKD7};
CC -!- PATHWAY: Carbohydrate degradation; pentose phosphate pathway; D-ribose
CC 5-phosphate from D-ribulose 5-phosphate (non-oxidative stage): step
CC 1/1. {ECO:0000250|UniProtKB:P9WKD7}.
CC -!- SUBUNIT: Homodimer. {ECO:0000250|UniProtKB:P9WKD7}.
CC -!- MISCELLANEOUS: In mycobacterial enzymes, the usual proton acceptor is
CC not a cysteine, but is remplaced by a glutamate.
CC {ECO:0000250|UniProtKB:P9WKD7}.
CC -!- SIMILARITY: Belongs to the LacAB/RpiB family. {ECO:0000305}.
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DR EMBL; AE016958; AAS04602.1; -; Genomic_DNA.
DR RefSeq; WP_003875844.1; NC_002944.2.
DR AlphaFoldDB; Q73XM4; -.
DR SMR; Q73XM4; -.
DR STRING; 262316.MAP_2285c; -.
DR EnsemblBacteria; AAS04602; AAS04602; MAP_2285c.
DR KEGG; mpa:MAP_2285c; -.
DR eggNOG; COG0698; Bacteria.
DR HOGENOM; CLU_091396_4_0_11; -.
DR OMA; DYPPFCL; -.
DR UniPathway; UPA00115; UER00412.
DR Proteomes; UP000000580; Chromosome.
DR GO; GO:0004751; F:ribose-5-phosphate isomerase activity; ISS:UniProtKB.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:UniProtKB-KW.
DR GO; GO:0009052; P:pentose-phosphate shunt, non-oxidative branch; ISS:UniProtKB.
DR Gene3D; 3.40.1400.10; -; 1.
DR InterPro; IPR011860; Rib-5-P_Isoase_Actino.
DR InterPro; IPR003500; RpiB_LacA_LacB.
DR InterPro; IPR036569; RpiB_LacA_LacB_sf.
DR PANTHER; PTHR30345; PTHR30345; 1.
DR Pfam; PF02502; LacAB_rpiB; 1.
DR PIRSF; PIRSF005384; RpiB_LacA_B; 1.
DR SUPFAM; SSF89623; SSF89623; 1.
DR TIGRFAMs; TIGR02133; RPI_actino; 1.
DR TIGRFAMs; TIGR00689; rpiB_lacA_lacB; 1.
PE 3: Inferred from homology;
KW Carbohydrate metabolism; Isomerase; Reference proteome.
FT CHAIN 1..159
FT /note="Ribose-5-phosphate isomerase B"
FT /id="PRO_0000251149"
FT ACT_SITE 72
FT /note="Proton acceptor"
FT /evidence="ECO:0000250|UniProtKB:P9WKD7"
FT ACT_SITE 99
FT /note="Proton donor"
FT /evidence="ECO:0000250|UniProtKB:P9WKD7"
FT BINDING 8..9
FT /ligand="D-ribulose 5-phosphate"
FT /ligand_id="ChEBI:CHEBI:58121"
FT /evidence="ECO:0000250|UniProtKB:P9WKD7"
FT BINDING 67..71
FT /ligand="D-ribulose 5-phosphate"
FT /ligand_id="ChEBI:CHEBI:58121"
FT /evidence="ECO:0000250|UniProtKB:P9WKD7"
FT BINDING 100
FT /ligand="D-ribulose 5-phosphate"
FT /ligand_id="ChEBI:CHEBI:58121"
FT /evidence="ECO:0000250|UniProtKB:P9WKD7"
FT BINDING 110
FT /ligand="D-ribulose 5-phosphate"
FT /ligand_id="ChEBI:CHEBI:58121"
FT /evidence="ECO:0000250|UniProtKB:P9WKD7"
FT BINDING 134
FT /ligand="D-ribulose 5-phosphate"
FT /ligand_id="ChEBI:CHEBI:58121"
FT /evidence="ECO:0000250|UniProtKB:P9WKD7"
FT BINDING 138
FT /ligand="D-ribulose 5-phosphate"
FT /ligand_id="ChEBI:CHEBI:58121"
FT /evidence="ECO:0000250|UniProtKB:P9WKD7"
SQ SEQUENCE 159 AA; 16939 MW; 159BBB97275006E0 CRC64;
MRVYLGSDHA GFELKQQIIA HLEQSGHQPI DCGAFSYDAD DDYPAFCIAA ATRTVADPDS
LGIVLGGSGN GEQIAANKVP GARCALAWSV ETAQLAREHN NAQLIGIGGR MHTVAEALAI
VDAFVTTPWS KAPRHQRRID ILAEYERTHQ APPVPGAVG