RPO11_THEAC
ID RPO11_THEAC Reviewed; 111 AA.
AC Q9HIC5;
DT 27-MAY-2002, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 109.
DE RecName: Full=DNA-directed RNA polymerase subunit Rpo11 {ECO:0000255|HAMAP-Rule:MF_00261};
DE EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00261};
DE AltName: Full=DNA-directed RNA polymerase subunit L {ECO:0000255|HAMAP-Rule:MF_00261, ECO:0000303|Ref.2};
GN Name=rpo11 {ECO:0000255|HAMAP-Rule:MF_00261};
GN Synonyms=rpoL {ECO:0000255|HAMAP-Rule:MF_00261}; OrderedLocusNames=Ta1416;
OS Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC
OS 15155 / AMRC-C165).
OC Archaea; Candidatus Thermoplasmatota; Thermoplasmata; Thermoplasmatales;
OC Thermoplasmataceae; Thermoplasma.
OX NCBI_TaxID=273075;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165;
RX PubMed=11029001; DOI=10.1038/35035069;
RA Ruepp A., Graml W., Santos-Martinez M.-L., Koretke K.K., Volker C.,
RA Mewes H.-W., Frishman D., Stocker S., Lupas A.N., Baumeister W.;
RT "The genome sequence of the thermoacidophilic scavenger Thermoplasma
RT acidophilum.";
RL Nature 407:508-513(2000).
RN [2] {ECO:0007744|PDB:1XPP}
RP X-RAY CRYSTALLOGRAPHY (1.60 ANGSTROMS).
RA Kim Y., Joachimiak A., Evdokimova E., Savchenko A., Edwards A.;
RT "Crystal structure of TA1416, DNA-directed RNA polymerase subunit L, from
RT Thermoplasma acidophilum.";
RL Submitted (NOV-2004) to the PDB data bank.
CC -!- FUNCTION: DNA-dependent RNA polymerase (RNAP) catalyzes the
CC transcription of DNA into RNA using the four ribonucleoside
CC triphosphates as substrates. {ECO:0000255|HAMAP-Rule:MF_00261}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.6; Evidence={ECO:0000255|HAMAP-Rule:MF_00261};
CC -!- SUBUNIT: Part of the RNA polymerase complex. {ECO:0000255|HAMAP-
CC Rule:MF_00261}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00261}.
CC -!- SIMILARITY: Belongs to the archaeal Rpo11/eukaryotic RPB11/RPC19 RNA
CC polymerase subunit family. {ECO:0000255|HAMAP-Rule:MF_00261}.
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DR EMBL; AL445067; CAC12536.1; -; Genomic_DNA.
DR RefSeq; WP_010901819.1; NC_002578.1.
DR PDB; 1XPP; X-ray; 1.60 A; A/B/C/D=1-111.
DR PDBsum; 1XPP; -.
DR AlphaFoldDB; Q9HIC5; -.
DR SMR; Q9HIC5; -.
DR STRING; 273075.Ta1416; -.
DR EnsemblBacteria; CAC12536; CAC12536; CAC12536.
DR GeneID; 1456876; -.
DR KEGG; tac:Ta1416; -.
DR eggNOG; arCOG04111; Archaea.
DR HOGENOM; CLU_090381_5_2_2; -.
DR OMA; VEMINYD; -.
DR OrthoDB; 129321at2157; -.
DR EvolutionaryTrace; Q9HIC5; -.
DR Proteomes; UP000001024; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.1360.10; -; 1.
DR HAMAP; MF_00261; RNApol_arch_Rpo11; 1.
DR InterPro; IPR036603; RBP11-like.
DR InterPro; IPR009025; RBP11-like_dimer.
DR InterPro; IPR008193; RNA_pol_Rpb11_13-16kDa_CS.
DR InterPro; IPR022905; Rpo11.
DR Pfam; PF13656; RNA_pol_L_2; 1.
DR SUPFAM; SSF55257; SSF55257; 1.
DR PROSITE; PS01154; RNA_POL_L_13KD; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Cytoplasm; DNA-directed RNA polymerase;
KW Nucleotidyltransferase; Reference proteome; Transcription; Transferase.
FT CHAIN 1..111
FT /note="DNA-directed RNA polymerase subunit Rpo11"
FT /id="PRO_0000149341"
FT STRAND 10..16
FT /evidence="ECO:0007829|PDB:1XPP"
FT STRAND 18..27
FT /evidence="ECO:0007829|PDB:1XPP"
FT HELIX 30..40
FT /evidence="ECO:0007829|PDB:1XPP"
FT STRAND 46..52
FT /evidence="ECO:0007829|PDB:1XPP"
FT TURN 56..58
FT /evidence="ECO:0007829|PDB:1XPP"
FT STRAND 62..70
FT /evidence="ECO:0007829|PDB:1XPP"
FT HELIX 72..104
FT /evidence="ECO:0007829|PDB:1XPP"
SQ SEQUENCE 111 AA; 13133 MW; 8EE9BE506B177F6C CRC64;
MQRERTAESS LRVISKEKNS ITVEMINYDN TLLRTLVEEI LKDDQVDEAR YYIKHPVIDN
PQIYVRVKSG KPQSAIKRAV RKLSKLYEDL GTQFQKEFQR YESDHMIKAV E