RPO1C_METTW
ID RPO1C_METTW Reviewed; 449 AA.
AC P09847;
DT 01-JUL-1989, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1990, sequence version 2.
DT 03-AUG-2022, entry version 81.
DE RecName: Full=DNA-directed RNA polymerase subunit Rpo1C {ECO:0000255|HAMAP-Rule:MF_00411};
DE EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00411};
DE AltName: Full=DNA-directed RNA polymerase subunit A'' {ECO:0000255|HAMAP-Rule:MF_00411};
GN Name=rpo1C {ECO:0000255|HAMAP-Rule:MF_00411};
GN Synonyms=rpoA2 {ECO:0000255|HAMAP-Rule:MF_00411};
OS Methanothermobacter thermautotrophicus (strain Winter) (Methanobacterium
OS thermoautotrophicum).
OC Archaea; Euryarchaeota; Methanomada group; Methanobacteria;
OC Methanobacteriales; Methanobacteriaceae; Methanothermobacter.
OX NCBI_TaxID=79930;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND SUBUNIT.
RX PubMed=2843811; DOI=10.1093/nar/16.16.8113;
RA Berghoefer B., Kroeckel L., Koertner C., Truss M., Schallenberg J.,
RA Klein A.;
RT "Relatedness of archaebacterial RNA polymerase core subunits to their
RT eubacterial and eukaryotic equivalents.";
RL Nucleic Acids Res. 16:8113-8128(1988).
CC -!- FUNCTION: DNA-dependent RNA polymerase (RNAP) catalyzes the
CC transcription of DNA into RNA using the four ribonucleoside
CC triphosphates as substrates. Forms part of the jaw domain.
CC {ECO:0000255|HAMAP-Rule:MF_00411}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.6; Evidence={ECO:0000255|HAMAP-Rule:MF_00411};
CC -!- SUBUNIT: Part of the RNA polymerase complex. {ECO:0000255|HAMAP-
CC Rule:MF_00411, ECO:0000269|PubMed:2843811}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00411}.
CC -!- SIMILARITY: Belongs to the RNA polymerase beta' chain family.
CC {ECO:0000255|HAMAP-Rule:MF_00411}.
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DR EMBL; X08038; CAA30839.1; -; Genomic_DNA.
DR PIR; S02197; S02197.
DR AlphaFoldDB; P09847; -.
DR SMR; P09847; -.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR CDD; cd06528; RNAP_A; 1.
DR HAMAP; MF_00411; RNApol_arch_Rpo1C; 1.
DR InterPro; IPR045867; DNA-dir_RpoC_beta_prime.
DR InterPro; IPR007081; RNA_pol_Rpb1_5.
DR InterPro; IPR012757; RPO1C.
DR PANTHER; PTHR19376; PTHR19376; 1.
DR Pfam; PF04998; RNA_pol_Rpb1_5; 1.
DR TIGRFAMs; TIGR02389; RNA_pol_rpoA2; 1.
PE 1: Evidence at protein level;
KW Cytoplasm; DNA-binding; DNA-directed RNA polymerase;
KW Nucleotidyltransferase; Transcription; Transferase.
FT CHAIN 1..449
FT /note="DNA-directed RNA polymerase subunit Rpo1C"
FT /id="PRO_0000074018"
FT REGION 1..68
FT /note="Unknown"
FT REGION 69..449
FT /note="DNA-directed RNA polymerase subunit Rpo1C"
SQ SEQUENCE 449 AA; 50796 MW; 6856FAA82E1A390C CRC64;
MQDVIKKIED YSSRNGIMLP NPVTEYVAGI AEEEKLKDPE LHDLVRLFSR ICERNRGLEG
EELLKAVEDE YLRILKVREL VKRKRAKFPP RLIEEIAEAI KRHGLSDDEL DELVRGVRRA
YERAMVEAGE AVGTVAAQSV GEPGTQMTMR TFHYAGVAEL NVTLGLPRLI EIVDARKKIS
TPTMSIYFEG DRKYDEEFVR KKANKICKST LNDVLKNFSI QYADMSVEAE LDEEKIREKH
LEYDDIIAKV EKTFKKVEID NNILRFEPPK PTIRELRLLA DKVRKLQISG VKNIGKVVIR
KEDDEWVIHT EGSNLGDRFK EEGVDKVRTT TNDIHEIETV LGIEAARNAI IHEAKRTMEE
QGLTVDIRHI MLVADMMTAD GSVKSIGRHG ISGEKASVLA RASFEETGKH LLRASIRGEV
DHLTGIIENI IIGQPIPLGT GSVSVIMKK