RPO1C_THEVO
ID RPO1C_THEVO Reviewed; 508 AA.
AC Q979F5;
DT 15-MAY-2002, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2001, sequence version 1.
DT 03-AUG-2022, entry version 96.
DE RecName: Full=DNA-directed RNA polymerase subunit Rpo1C {ECO:0000255|HAMAP-Rule:MF_00411};
DE EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00411};
DE AltName: Full=DNA-directed RNA polymerase subunit A'' {ECO:0000255|HAMAP-Rule:MF_00411};
GN Name=rpo1C {ECO:0000255|HAMAP-Rule:MF_00411};
GN Synonyms=rpoA2 {ECO:0000255|HAMAP-Rule:MF_00411}; OrderedLocusNames=TV1206;
GN ORFNames=TVG1233699;
OS Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC
OS 15438 / GSS1).
OC Archaea; Candidatus Thermoplasmatota; Thermoplasmata; Thermoplasmatales;
OC Thermoplasmataceae; Thermoplasma.
OX NCBI_TaxID=273116;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1;
RX PubMed=11121031; DOI=10.1073/pnas.97.26.14257;
RA Kawashima T., Amano N., Koike H., Makino S., Higuchi S., Kawashima-Ohya Y.,
RA Watanabe K., Yamazaki M., Kanehori K., Kawamoto T., Nunoshiba T.,
RA Yamamoto Y., Aramaki H., Makino K., Suzuki M.;
RT "Archaeal adaptation to higher temperatures revealed by genomic sequence of
RT Thermoplasma volcanium.";
RL Proc. Natl. Acad. Sci. U.S.A. 97:14257-14262(2000).
CC -!- FUNCTION: DNA-dependent RNA polymerase (RNAP) catalyzes the
CC transcription of DNA into RNA using the four ribonucleoside
CC triphosphates as substrates. Forms part of the jaw domain.
CC {ECO:0000255|HAMAP-Rule:MF_00411}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.6; Evidence={ECO:0000255|HAMAP-Rule:MF_00411};
CC -!- SUBUNIT: Part of the RNA polymerase complex. {ECO:0000255|HAMAP-
CC Rule:MF_00411}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00411}.
CC -!- SIMILARITY: Belongs to the RNA polymerase beta' chain family.
CC {ECO:0000255|HAMAP-Rule:MF_00411}.
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DR EMBL; BA000011; BAB60348.1; -; Genomic_DNA.
DR AlphaFoldDB; Q979F5; -.
DR SMR; Q979F5; -.
DR STRING; 273116.14325444; -.
DR EnsemblBacteria; BAB60348; BAB60348; BAB60348.
DR KEGG; tvo:TVG1233699; -.
DR eggNOG; arCOG04256; Archaea.
DR HOGENOM; CLU_037097_1_0_2; -.
DR OMA; TPMMTVY; -.
DR PhylomeDB; Q979F5; -.
DR Proteomes; UP000001017; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR CDD; cd06528; RNAP_A; 1.
DR HAMAP; MF_00411; RNApol_arch_Rpo1C; 1.
DR InterPro; IPR045867; DNA-dir_RpoC_beta_prime.
DR InterPro; IPR007081; RNA_pol_Rpb1_5.
DR InterPro; IPR012757; RPO1C.
DR PANTHER; PTHR19376; PTHR19376; 1.
DR Pfam; PF04998; RNA_pol_Rpb1_5; 1.
DR TIGRFAMs; TIGR02389; RNA_pol_rpoA2; 1.
PE 3: Inferred from homology;
KW Cytoplasm; DNA-binding; DNA-directed RNA polymerase;
KW Nucleotidyltransferase; Transcription; Transferase.
FT CHAIN 1..508
FT /note="DNA-directed RNA polymerase subunit Rpo1C"
FT /id="PRO_0000074030"
FT REGION 1..123
FT /note="Unknown"
FT REGION 124..508
FT /note="DNA-directed RNA polymerase subunit Rpo1C"
SQ SEQUENCE 508 AA; 56950 MW; 0B17ABCBFE0118FE CRC64;
MIIWKDTAKN MSLLSKSVPA KYAVDFEVPK GITEGYVTSD KKRFTYHVSI SSVAPYSNES
DVIQKKKSGL KSIMEIEKIQ KIEPISIMEF RSSGKRIDEL LTYAIAERET AEIREKYEYE
KKVSSQVLDV IAEAKKLGYN IPESVAEEIL RRKEEWGEKK YREILKRIGE EIQDELIDPY
EAVGIIAAQS IGEPGTQMTM RTFHFAGVRE MNVTLGLPRL IEIVDARRIP STPSMTIYLK
PEFETNDEVV MDVVKRLENT SVSDVADIIT DIGELTITVR PDPNKMNDRL INQDDLVNAI
YKVKGVTVME ESGQIIVKPQ QESFKKLYLL QEQIKALPIK GISGIKRAIA RVEGKEHRWV
IYTQGSNLKD VLEVDEVDPT RTYTNDIVEI ATVLGIEAAR NAILNEAQRT LQEQGLNVDV
RHLMLVADMM TFSGSVRAVG RTGISGRKSS VLARAAFEIT TKHLLRAGIM GEVDKLAGVA
ENIIVGQPIT LGTGAVDIIY KGYPKTKK