RPO2N_HALSA
ID RPO2N_HALSA Reviewed; 523 AA.
AC P0CX04; P15352; Q9HM77;
DT 28-JUN-2011, integrated into UniProtKB/Swiss-Prot.
DT 28-JUN-2011, sequence version 1.
DT 03-AUG-2022, entry version 56.
DE RecName: Full=DNA-directed RNA polymerase subunit Rpo2N {ECO:0000305};
DE EC=2.7.7.6 {ECO:0000250|UniProtKB:P11513};
DE AltName: Full=DNA-directed RNA polymerase subunit B'' {ECO:0000303|PubMed:11016950};
GN Name=rpo2N {ECO:0000305};
GN Synonyms=rpoB'' {ECO:0000303|PubMed:11016950}, rpoB2;
GN OrderedLocusNames=VNG_2666G;
OS Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
OS (Halobacterium halobium).
OC Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Halobacteriales;
OC Halobacteriaceae; Halobacterium.
OX NCBI_TaxID=64091;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700922 / JCM 11081 / NRC-1;
RX PubMed=11016950; DOI=10.1073/pnas.190337797;
RA Ng W.V., Kennedy S.P., Mahairas G.G., Berquist B., Pan M., Shukla H.D.,
RA Lasky S.R., Baliga N.S., Thorsson V., Sbrogna J., Swartzell S., Weir D.,
RA Hall J., Dahl T.A., Welti R., Goo Y.A., Leithauser B., Keller K., Cruz R.,
RA Danson M.J., Hough D.W., Maddocks D.G., Jablonski P.E., Krebs M.P.,
RA Angevine C.M., Dale H., Isenbarger T.A., Peck R.F., Pohlschroder M.,
RA Spudich J.L., Jung K.-H., Alam M., Freitas T., Hou S., Daniels C.J.,
RA Dennis P.P., Omer A.D., Ebhardt H., Lowe T.M., Liang P., Riley M., Hood L.,
RA DasSarma S.;
RT "Genome sequence of Halobacterium species NRC-1.";
RL Proc. Natl. Acad. Sci. U.S.A. 97:12176-12181(2000).
CC -!- FUNCTION: DNA-dependent RNA polymerase (RNAP) catalyzes the
CC transcription of DNA into RNA using the four ribonucleoside
CC triphosphates as substrates. The Rpo2 subunit (Rpo2N and Rpo2C in this
CC organism) is implicated in DNA promoter recognition and in nucleotide
CC binding. {ECO:0000250|UniProtKB:B8YB55}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.6; Evidence={ECO:0000250|UniProtKB:P11513};
CC -!- SUBUNIT: Part of the RNA polymerase complex.
CC {ECO:0000250|UniProtKB:B8YB55}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250|UniProtKB:B8YB55}.
CC -!- SIMILARITY: Belongs to the RNA polymerase beta chain family.
CC {ECO:0000305}.
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DR EMBL; AE004437; AAG20694.1; -; Genomic_DNA.
DR PIR; B84416; B84416.
DR RefSeq; WP_010903998.1; NC_002607.1.
DR AlphaFoldDB; P0CX04; -.
DR SMR; P0CX04; -.
DR STRING; 64091.VNG_2666G; -.
DR PaxDb; P0CX04; -.
DR EnsemblBacteria; AAG20694; AAG20694; VNG_2666G.
DR GeneID; 1448999; -.
DR GeneID; 5954244; -.
DR GeneID; 62887874; -.
DR KEGG; hal:VNG_2666G; -.
DR PATRIC; fig|64091.14.peg.2071; -.
DR HOGENOM; CLU_000524_5_3_2; -.
DR InParanoid; P0CX04; -.
DR OMA; GKICPSE; -.
DR PhylomeDB; P0CX04; -.
DR Proteomes; UP000000554; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0032549; F:ribonucleoside binding; IEA:InterPro.
DR GO; GO:0006351; P:transcription, DNA-templated; IEA:InterPro.
DR Gene3D; 3.90.1110.10; -; 1.
DR InterPro; IPR015712; DNA-dir_RNA_pol_su2.
DR InterPro; IPR007644; RNA_pol_bsu_protrusion.
DR InterPro; IPR007642; RNA_pol_Rpb2_2.
DR InterPro; IPR037034; RNA_pol_Rpb2_2_sf.
DR InterPro; IPR007645; RNA_pol_Rpb2_3.
DR PANTHER; PTHR20856; PTHR20856; 1.
DR Pfam; PF04563; RNA_pol_Rpb2_1; 1.
DR Pfam; PF04561; RNA_pol_Rpb2_2; 1.
DR Pfam; PF04565; RNA_pol_Rpb2_3; 1.
PE 3: Inferred from homology;
KW Cytoplasm; DNA-binding; DNA-directed RNA polymerase;
KW Nucleotidyltransferase; Reference proteome; Transcription; Transferase.
FT CHAIN 1..523
FT /note="DNA-directed RNA polymerase subunit Rpo2N"
FT /id="PRO_0000074031"
FT REGION 501..523
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 523 AA; 59396 MW; BB5CF4F80D5354E8 CRC64;
MLQEDKRELS ESYFSKERLA EHHFRSYNAF LEHGMQDVVT EKERIETDIG DKEDEEPVWV
ELGDVRAVTP RVREADGSEE LLYPQEARLR NITYSAPVFM EMSIVRGGEE EEERVLDTTE
TKVGRMPIMV GSDKCNISGF SDEELIEIGE DPADPGGYFI INGSERVLMT SEDLAPNKIL
AEYDSKYGDE IQVAKTFSQR RGYRALVLVE RNREGLLEVS FPSVSGSISF VTLVRALGLE
SDEEIVHRVS EDPEIVKFML ENLEEADVQT QEEAIEDLGQ RVASGQGKNY QLKRANYVID
RYLLPHLHED GVEEEETRIN KAYYLCRMAE ACFELALGRR EADDKDHYAN KRLKVSGDLM
KDLFRTALNK LARDVKYQLE RANMRNRELT VNTVVRSDVL TERLEHPIAT GNWVGGRSGV
SQLVDRTDFM GVLSHLRRLR SPLSRSQPHF EARDLHATQW GRICPSETPE GPNCGLVKNF
AQAMELSQDV DDERDLKQEL SSMGVEGIPG ISMETTSTTS ADD