AB38G_ARATH
ID AB38G_ARATH Reviewed; 1418 AA.
AC Q7PC85; F4J7V6; Q9LHK8;
DT 16-MAY-2006, integrated into UniProtKB/Swiss-Prot.
DT 15-DEC-2003, sequence version 1.
DT 03-AUG-2022, entry version 114.
DE RecName: Full=ABC transporter G family member 38;
DE Short=ABC transporter ABCG.38;
DE Short=AtABCG38;
DE AltName: Full=Pleiotropic drug resistance protein 10;
GN Name=ABCG38; Synonyms=PDR10; OrderedLocusNames=At3g30842; ORFNames=MJI6.3;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RA Nakamura Y.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. III.";
RL Submitted (MAY-2000) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP IDENTIFICATION, AND TISSUE SPECIFICITY.
RX PubMed=12430018; DOI=10.1007/s00425-002-0889-z;
RA van den Brule S., Smart C.C.;
RT "The plant PDR family of ABC transporters.";
RL Planta 216:95-106(2002).
RN [4]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=16506311; DOI=10.1016/j.febslet.2005.12.043;
RA Crouzet J., Trombik T., Fraysse A.S., Boutry M.;
RT "Organization and function of the plant pleiotropic drug resistance ABC
RT transporter family.";
RL FEBS Lett. 580:1123-1130(2006).
RN [5]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=18299247; DOI=10.1016/j.tplants.2008.02.001;
RA Verrier P.J., Bird D., Burla B., Dassa E., Forestier C., Geisler M.,
RA Klein M., Kolukisaoglu H.U., Lee Y., Martinoia E., Murphy A., Rea P.A.,
RA Samuels L., Schulz B., Spalding E.J., Yazaki K., Theodoulou F.L.;
RT "Plant ABC proteins - a unified nomenclature and updated inventory.";
RL Trends Plant Sci. 13:151-159(2008).
CC -!- FUNCTION: May be a general defense protein. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000250}; Multi-pass membrane
CC protein {ECO:0000250}.
CC -!- TISSUE SPECIFICITY: Expressed in roots and siliques at low levels.
CC {ECO:0000269|PubMed:12430018}.
CC -!- SIMILARITY: Belongs to the ABC transporter superfamily. ABCG family.
CC PDR (TC 3.A.1.205) subfamily. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAB02609.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AP002043; BAB02609.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002686; AEE77665.2; -; Genomic_DNA.
DR EMBL; BK001009; DAA00878.1; -; Genomic_DNA.
DR RefSeq; NP_001319673.1; NM_001339062.1.
DR AlphaFoldDB; Q7PC85; -.
DR SMR; Q7PC85; -.
DR STRING; 3702.AT3G30842.1; -.
DR PaxDb; Q7PC85; -.
DR PRIDE; Q7PC85; -.
DR ProteomicsDB; 244513; -.
DR EnsemblPlants; AT3G30842.1; AT3G30842.1; AT3G30842.
DR GeneID; 822863; -.
DR Gramene; AT3G30842.1; AT3G30842.1; AT3G30842.
DR KEGG; ath:AT3G30842; -.
DR Araport; AT3G30842; -.
DR eggNOG; KOG0065; Eukaryota.
DR InParanoid; Q7PC85; -.
DR OMA; KWLTWAY; -.
DR OrthoDB; 324553at2759; -.
DR PhylomeDB; Q7PC85; -.
DR PRO; PR:Q7PC85; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q7PC85; baseline and differential.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0140359; F:ABC-type transporter activity; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR CDD; cd03233; ABCG_PDR_domain1; 1.
DR CDD; cd03232; ABCG_PDR_domain2; 1.
DR Gene3D; 3.40.50.300; -; 2.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR013525; ABC_2_trans.
DR InterPro; IPR029481; ABC_trans_N.
DR InterPro; IPR003439; ABC_transporter-like_ATP-bd.
DR InterPro; IPR043926; ABCG_dom.
DR InterPro; IPR034001; ABCG_PDR_1.
DR InterPro; IPR034003; ABCG_PDR_2.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR013581; PDR_assoc.
DR Pfam; PF01061; ABC2_membrane; 2.
DR Pfam; PF19055; ABC2_membrane_7; 1.
DR Pfam; PF00005; ABC_tran; 2.
DR Pfam; PF14510; ABC_trans_N; 1.
DR Pfam; PF08370; PDR_assoc; 1.
DR SMART; SM00382; AAA; 2.
DR SUPFAM; SSF52540; SSF52540; 2.
DR PROSITE; PS50893; ABC_TRANSPORTER_2; 2.
PE 2: Evidence at transcript level;
KW ATP-binding; Membrane; Nucleotide-binding; Reference proteome; Repeat;
KW Transmembrane; Transmembrane helix; Transport.
FT CHAIN 1..1418
FT /note="ABC transporter G family member 38"
FT /id="PRO_0000234637"
FT TRANSMEM 516..536
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 548..568
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 600..620
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 634..654
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 659..679
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 729..749
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 1167..1187
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 1197..1217
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 1249..1269
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 1284..1304
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 1310..1330
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 1341..1361
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 1387..1407
FT /note="Helical"
FT /evidence="ECO:0000255"
FT DOMAIN 147..419
FT /note="ABC transporter 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00434"
FT DOMAIN 497..710
FT /note="ABC transmembrane type-2 1"
FT DOMAIN 821..1073
FT /note="ABC transporter 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00434"
FT DOMAIN 1146..1360
FT /note="ABC transmembrane type-2 2"
FT REGION 1..27
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 10..27
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 179..186
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /ligand_label="1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00434"
FT BINDING 866..873
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /ligand_label="2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00434"
SQ SEQUENCE 1418 AA; 161362 MW; 4547C89AEB3587A4 CRC64;
MAHYRVSSEV ENIMNRDRSH RKNEEEDEEE ALKLAAMEKL QRLPTYDRAR KAVLKGITGG
FKEIDMKDLG LAERRELFDR VMTMDDEDWH GEYLRRLKSR FDRVSLHLPT IEVRFEDLNV
TAEAYAGSKT VPTVLNSYVN LLKGIGTKIR VLPDRKKRIS ILNDVSGIIK PGRLTLLLGP
PGSGKSTLLK ALSGKTETGL RSTGKVTYNG HELHEFVPER TAGYIDQYDV HLPDLTVRET
LKFSAKCQGV GTGYDMLAEL LRREKDLNIK PDPYLDALMK ASVIKGHKEY VVTDYVLKVL
GLEICADTIV GNHMKRGISG GQKKRVTTGE MLVGPVGAFF MDNISDGLDS STTFQIVKSI
KQMIHVFDKT ALISLLQPPP ETFELFDDVI ILGEGHIVYQ GPREDVLEFF EFMGFKCPER
KGIADYLQEI LSKKDQEQYW ANPELPYRYV TAKKFEEGFK IHHFGRAMRS QLATPFDRLK
NHRAALTRTT YGASKLELLK ACLERESILM KRNLRTFVLK SLQLIINAIL IGVVFWQQKN
YPSTVEDGII YMGAIYLEVQ MIVFSGFFEL PMTIDKLPVF YKQRHFSFYP SWAFSLPTSI
ITFPLSFVEV FIVVLITYFT IGYDLTVPSF LKHYLVLALC GQMSYGLFRC IAAVTRNHVV
SNTMGCLAVM WLMTFSGYVL SRNQVHKWLT WAYWTSPMMY IQTAVSVNEF RSESWKDGLG
VAVLKSRGFF VETYWYWIGL LALILSTILS NIITSLCLAF LKQYGISKTA VLPDEREEAD
SNNTTGRDYT GTTMERFFDR VVTTRTCNDK KLRIPFKPLY MTFENITYSV DTPKEMKEKG
IRENKLVLLN GLSGAFRPGV LTALMGVSGA GKTTLMDVLA GRKNTGYIQG EIYVSGFPKK
QDSFARVSGY CEQSDIHSPL LTVYESLLYS AWLRLPPDID THTRELFIEE VMELIELKAL
REMLVGYVGI SGLSTEQRKR MTIAVELVAN PSILFMDEPT SGLDARAAAI VMRTVRNTVD
TGRTVVCTIH QPSIDIFESF DELFLLTRGG EEIYVGPIGH HSSQLIEYFE GIRGVGKIKE
GYNPATWALE VTTRAQEDVL GVTFAQVYKK SNLYRRNKDL IKELNNIPPH AQDIHFSTKY
SQSYLSQFQA CLWKQHKSYW RNVPYNAVRF SFGAAVGIMY GIIFWSLGKR KGTRQDIFNS
VGAMSTVVGF LSSQSAATVR PVVIAERTVF YREAGAGMYS ALPYAFSQVI IEIPYTMAQA
CIYGVIVYGM IGYEWTASKF FLNIFFTFIS ILYSIYTGIM VISVSPNQEI ASILNGVIST
SWNVFSGFTI PRPRMHVWLR WFTYVCPGWW GLYGLTIAQY GDVETRLDTG ETVVEFMKNY
YGYEYNFLWV VSLTLIAFSM FFVFIYAFSV KILNFQKR