RPOB_ANADF
ID RPOB_ANADF Reviewed; 1416 AA.
AC A7HCH7;
DT 15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT 11-SEP-2007, sequence version 1.
DT 03-AUG-2022, entry version 83.
DE RecName: Full=DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};
DE AltName: Full=RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE AltName: Full=Transcriptase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
GN Name=rpoB {ECO:0000255|HAMAP-Rule:MF_01321};
GN OrderedLocusNames=Anae109_2221;
OS Anaeromyxobacter sp. (strain Fw109-5).
OC Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales;
OC Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter;
OC unclassified Anaeromyxobacter.
OX NCBI_TaxID=404589;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Fw109-5;
RX PubMed=25614562; DOI=10.1128/genomea.01449-14;
RA Hwang C., Copeland A., Lucas S., Lapidus A., Barry K., Glavina Del Rio T.,
RA Dalin E., Tice H., Pitluck S., Sims D., Brettin T., Bruce D.C.,
RA Detter J.C., Han C.S., Schmutz J., Larimer F.W., Land M.L., Hauser L.J.,
RA Kyrpides N., Lykidis A., Richardson P., Belieav A., Sanford R.A.,
RA Loeffler F.E., Fields M.W.;
RT "Complete genome sequence of Anaeromyxobacter sp. Fw109-5, an anaerobic,
RT metal-reducing bacterium isolated from a contaminated subsurface
RT environment.";
RL Genome Announc. 3:0-0(2015).
CC -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of
CC DNA into RNA using the four ribonucleoside triphosphates as substrates.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.6; Evidence={ECO:0000255|HAMAP-Rule:MF_01321};
CC -!- SUBUNIT: The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta'
CC and 1 omega subunit. When a sigma factor is associated with the core
CC the holoenzyme is formed, which can initiate transcription.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
CC -!- SIMILARITY: Belongs to the RNA polymerase beta chain family.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
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DR EMBL; CP000769; ABS26423.1; -; Genomic_DNA.
DR RefSeq; WP_012097005.1; NC_009675.1.
DR AlphaFoldDB; A7HCH7; -.
DR SMR; A7HCH7; -.
DR STRING; 404589.Anae109_2221; -.
DR PRIDE; A7HCH7; -.
DR EnsemblBacteria; ABS26423; ABS26423; Anae109_2221.
DR KEGG; afw:Anae109_2221; -.
DR eggNOG; COG0085; Bacteria.
DR HOGENOM; CLU_000524_4_3_7; -.
DR OMA; FMTWEGY; -.
DR OrthoDB; 9601at2; -.
DR Proteomes; UP000006382; Chromosome.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0032549; F:ribonucleoside binding; IEA:InterPro.
DR GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR CDD; cd00653; RNA_pol_B_RPB2; 1.
DR Gene3D; 2.30.150.10; -; 1.
DR Gene3D; 2.40.270.10; -; 1.
DR Gene3D; 2.40.50.150; -; 1.
DR Gene3D; 3.90.1110.10; -; 1.
DR HAMAP; MF_01321; RNApol_bact_RpoB; 1.
DR InterPro; IPR042107; DNA-dir_RNA_pol_bsu_ext_1_sf.
DR InterPro; IPR019462; DNA-dir_RNA_pol_bsu_external_1.
DR InterPro; IPR015712; DNA-dir_RNA_pol_su2.
DR InterPro; IPR007120; DNA-dir_RNAP_su2_dom.
DR InterPro; IPR037033; DNA-dir_RNAP_su2_hyb_sf.
DR InterPro; IPR010243; RNA_pol_bsu_bac.
DR InterPro; IPR007121; RNA_pol_bsu_CS.
DR InterPro; IPR007644; RNA_pol_bsu_protrusion.
DR InterPro; IPR007642; RNA_pol_Rpb2_2.
DR InterPro; IPR037034; RNA_pol_Rpb2_2_sf.
DR InterPro; IPR007645; RNA_pol_Rpb2_3.
DR InterPro; IPR007641; RNA_pol_Rpb2_7.
DR InterPro; IPR014724; RNA_pol_RPB2_OB-fold.
DR PANTHER; PTHR20856; PTHR20856; 1.
DR Pfam; PF04563; RNA_pol_Rpb2_1; 1.
DR Pfam; PF04561; RNA_pol_Rpb2_2; 2.
DR Pfam; PF04565; RNA_pol_Rpb2_3; 1.
DR Pfam; PF10385; RNA_pol_Rpb2_45; 1.
DR Pfam; PF00562; RNA_pol_Rpb2_6; 1.
DR Pfam; PF04560; RNA_pol_Rpb2_7; 1.
DR TIGRFAMs; TIGR02013; rpoB; 1.
DR PROSITE; PS01166; RNA_POL_BETA; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase; Nucleotidyltransferase; Reference proteome;
KW Transcription; Transferase.
FT CHAIN 1..1416
FT /note="DNA-directed RNA polymerase subunit beta"
FT /id="PRO_1000051960"
FT REGION 1388..1416
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1416 AA; 158370 MW; 7310606D0344715E CRC64;
MATTIQNNFR IRRNFGKINK IAEIPNLIAI QKSSYDKFLQ ADVPPEKRED TGLQGVFKSV
FPIKDFNETS SLEFVSYHLE KPKYDVDECH QRGMTYSAPI KVVVRLVVWD KDEETGAQSI
RDVKEQEVYF GEIPLMTENG TFIINGTERV VVSQLHRSPG AFFDHDKGKS HSSGKLLFNA
RIIPYRGSWI DFEFDHKDIL YVRIDRRRKL PATVLLRALG GVPDTAKKTP IEFHGSAEEI
LKYYYDTETI RIEGKGKFEK DLNPDLLKGQ RATRDIRDPK TNEIVVKKNR KFTESAIKKL
VAAKMKSLPI EPEEVYTKIS AEDVVDEQTG EVLLEVNEEV SEEKLEELRK RGIGEFKVLF
IDNLNVLPSL RDTLMQDKIS TPEEAIMEIY RRLRPGDPPT PETATNLFVN LFFNAERYDL
SKVGRLKLNY KFGIEEPLDN TVVTKRDILE VVRFLIDLKN GTPNKDVDDI DHLGNRRVRA
VGELLENQYR IGLVRMERAI KERMSLQEIE TLMPHDLINA KPVTAVIKEF FGSSQLSQFM
DQTNPLSEVT HKRRLSALGP GGLTRERAGF EVRDVHSTHY GRICPIETPE GPNIGLIASL
STYARVNEYG FVETPYRKVE KGRVTDEVSF YSALEEEKHI IAQANAPVDK KGVFTGNIVS
CRKEGEYINA RPDEVDLMDV SPNQLVSVAA SLVPFLENDD ANRALMGSNM QRQAVPLLRT
RAPLVGTGIE GIVARDSGVC VVAKRDGVIQ SVDAARIVVK ADVPTSATDV ANEVDIYNLI
KYQRSNQNTC INQKPIVKPG ERVKKGDVIA DGPATEMGEL ALGQNVVVAF MPWQGYNFED
SILLSERFLK DDVFTSVHIE EFECVARDTK LGKEEITRDI PNVGEEALKD LDESGIIRIG
AEVKPGDILV GKITPKGETQ LSPEEKLLRA IFGEKAGDVR DSSLRVPPGV SGTVINAKVF
SRKGVEKDER AKAIEEMEEA KLLKDQNDEI RIIQDSAFQK IRRLLLGKEV SGRLVDDKGN
QLLKRGDVLD DALLDTVPQR YWGEIAVEGD VQDLVRKIVE NFEEQKELVK LLFGEKIGRL
KKGDELPPGV IKMVKVYVAI KRKLAVGDKM AGRHGNKGVV SRVLPEEDLP YLEDGRPVDI
VLNPLGVPSR MNVGQILETH LGWAAKNVGW RLQEMIEKNF GPDQLRKKLK KAFEGVEGSD
RLGQLIDELP AQELPKLATK LKEGMHVATP VFDGAHEDEM KALLGEGSAT MQSILFDGRT
GEPFDQDVTV GVMYMLKLHH LVDEKIHARS IGPYSLVTQQ PLGGKAQFGG QRLGEMEVWA
MEAYGAAYSL QEFLTVKSDD VVGRTRMYEA IVKGENTLES GLPESFNVLI KELQSLALDV
ELLETPEAKA AREQAEGELG GPLGTPRGAA AEKNTA