RPOB_ANGEV
ID RPOB_ANGEV Reviewed; 1070 AA.
AC A2T324;
DT 11-SEP-2007, integrated into UniProtKB/Swiss-Prot.
DT 06-MAR-2007, sequence version 1.
DT 03-AUG-2022, entry version 60.
DE RecName: Full=DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};
DE AltName: Full=PEP {ECO:0000255|HAMAP-Rule:MF_01321};
DE AltName: Full=Plastid-encoded RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE Short=RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
GN Name=rpoB {ECO:0000255|HAMAP-Rule:MF_01321};
OS Angiopteris evecta (Mule's foot fern) (Polypodium evectum).
OG Plastid; Chloroplast.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Polypodiopsida; Marattiidae; Marattiales; Marattiaceae; Angiopteris.
OX NCBI_TaxID=13825;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Roper J.M., Hansen S.K., Wolf P.G., Karol K.G., Mandoli D.F.,
RA Everett K.D.E., Kuehl J.V., Boore J.L.;
RT "The complete plastid genome sequence of Angiopteris evecta (G. Forst.)
RT Hoffm. (Marattiaceae).";
RL Am. Fern J. 97:95-106(2007).
CC -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of
CC DNA into RNA using the four ribonucleoside triphosphates as substrates.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.6; Evidence={ECO:0000255|HAMAP-Rule:MF_01321};
CC -!- SUBUNIT: In plastids the minimal PEP RNA polymerase catalytic core is
CC composed of four subunits: alpha, beta, beta', and beta''. When a
CC (nuclear-encoded) sigma factor is associated with the core the
CC holoenzyme is formed, which can initiate transcription.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast.
CC -!- SIMILARITY: Belongs to the RNA polymerase beta chain family.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
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DR EMBL; DQ821119; ABG79591.1; -; Genomic_DNA.
DR RefSeq; YP_001023692.1; NC_008829.1.
DR AlphaFoldDB; A2T324; -.
DR SMR; A2T324; -.
DR GeneID; 4788203; -.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0032549; F:ribonucleoside binding; IEA:InterPro.
DR GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR CDD; cd00653; RNA_pol_B_RPB2; 1.
DR Gene3D; 2.30.150.10; -; 1.
DR Gene3D; 2.40.270.10; -; 1.
DR Gene3D; 2.40.50.150; -; 1.
DR Gene3D; 3.90.1110.10; -; 1.
DR HAMAP; MF_01321; RNApol_bact_RpoB; 1.
DR InterPro; IPR042107; DNA-dir_RNA_pol_bsu_ext_1_sf.
DR InterPro; IPR015712; DNA-dir_RNA_pol_su2.
DR InterPro; IPR007120; DNA-dir_RNAP_su2_dom.
DR InterPro; IPR037033; DNA-dir_RNAP_su2_hyb_sf.
DR InterPro; IPR010243; RNA_pol_bsu_bac.
DR InterPro; IPR007121; RNA_pol_bsu_CS.
DR InterPro; IPR007644; RNA_pol_bsu_protrusion.
DR InterPro; IPR007642; RNA_pol_Rpb2_2.
DR InterPro; IPR037034; RNA_pol_Rpb2_2_sf.
DR InterPro; IPR007645; RNA_pol_Rpb2_3.
DR InterPro; IPR007641; RNA_pol_Rpb2_7.
DR InterPro; IPR014724; RNA_pol_RPB2_OB-fold.
DR PANTHER; PTHR20856; PTHR20856; 3.
DR Pfam; PF04563; RNA_pol_Rpb2_1; 1.
DR Pfam; PF04561; RNA_pol_Rpb2_2; 1.
DR Pfam; PF04565; RNA_pol_Rpb2_3; 1.
DR Pfam; PF00562; RNA_pol_Rpb2_6; 1.
DR Pfam; PF04560; RNA_pol_Rpb2_7; 1.
DR PROSITE; PS01166; RNA_POL_BETA; 1.
PE 3: Inferred from homology;
KW Chloroplast; DNA-directed RNA polymerase; Nucleotidyltransferase; Plastid;
KW Transcription; Transferase.
FT CHAIN 1..1070
FT /note="DNA-directed RNA polymerase subunit beta"
FT /id="PRO_0000300431"
SQ SEQUENCE 1070 AA; 121389 MW; CA08FB380DEF3509 CRC64;
MILKENKKMF VLPEFGRIQF EGFQRFIHQD LVEELTNFPK IEDIDQEVEF RLFGERYRLT
EPCIKERDAV YQSFTYSSDL YVPAQLMRRR NGRIQRQTVH FGSIPLMNSQ GTFVINGIAR
VVINQILRSP GIYYDSELDH NGNSIYTGTI ISDWGGRFKS EIDGKKRIWV RLSKNRKVSI
IILLLAMGLN MNDILKNVRY PNIFLRLFQR QAENIQSYED AIVELYKNLY SAGGNLVFSD
SICKELQTKF FQQKFELGQF GRRNLNKKLN LDVPGNEHLL LPQDLLAAVD YLIGVNYGIG
TLDDIDDLKN RRVRSVADLL REQLGLALDR LEILIRQTIH TVARRKRLVT PKGLITSAPL
TTIFQDFFGS HSLSQFLDQT NPLAELTHKR RLSSLGPGGL TRRTASFQVR DINPSHYGRI
CPIETSEGMN AGLIASLAIH AKVNDRGSLL SPFYKISKTL GEEHIVYLSS EEDEYYRIAT
GNTLSLDREI REERATPARY RQEFLTIAWK QIHFRSIFPF QYFSIGTSLI PFLEHNDANR
ALMGSNMQRQ AVPLSQPEKC IVGTGLESQI ALDSGSVVVS NQDGQIAYLD GETISILLQN
EKTVDIKSII YERSNNNTCI HQRPVVSQGE RLRKGQLLAD GTATVGGELA LGRNILVAYM
PWEGYNFEDA VLISERLIYE DIYTSFHIER YEINIYTTSQ GPEKITKEIP HLDSYVLRHL
DNNGLVVPGS WVETGDVLVG KLTPQEAENS LRVPEGKLLQ AISGIQLANT RESCLKVPIG
GRGRVIDVRW IYDEDTLPNI ANMVHVYILQ KRKIQVGDKV AGRHGNKGIV SKILPRQDMP
YLQDGTPVDM ILSPLGVPSR MNVGQIFECL LGLAGDILKK HYRITPFDER YEREASRKLV
FSELHEASQE AAIPWLFEPD HPGKSRLIDG RTGDIFEQPV TIGKAYMMKL IHQVDDKIHA
RSSGPYALVT QQPLRGRSRG GGQRVGEMEV WALEGFGVSY ILQEMLTIKS DHIPARSKLL
GSIVTGKSIP KPNTVPESFR LLVRELRSLA VNSDHNLIFE KDLRKKVKDV