RPOB_BACVZ
ID RPOB_BACVZ Reviewed; 1196 AA.
AC A7Z0M9;
DT 08-APR-2008, integrated into UniProtKB/Swiss-Prot.
DT 23-OCT-2007, sequence version 1.
DT 03-AUG-2022, entry version 90.
DE RecName: Full=DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};
DE AltName: Full=RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE AltName: Full=Transcriptase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
GN Name=rpoB {ECO:0000255|HAMAP-Rule:MF_01321}; OrderedLocusNames=RBAM_001320;
OS Bacillus velezensis (strain DSM 23117 / BGSC 10A6 / LMG 26770 / FZB42)
OS (Bacillus amyloliquefaciens subsp. plantarum).
OC Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus;
OC Bacillus amyloliquefaciens group.
OX NCBI_TaxID=326423;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 23117 / BGSC 10A6 / LMG 26770 / FZB42;
RX PubMed=17704766; DOI=10.1038/nbt1325;
RA Chen X.H., Koumoutsi A., Scholz R., Eisenreich A., Schneider K.,
RA Heinemeyer I., Morgenstern B., Voss B., Hess W.R., Reva O., Junge H.,
RA Voigt B., Jungblut P.R., Vater J., Suessmuth R., Liesegang H.,
RA Strittmatter A., Gottschalk G., Borriss R.;
RT "Comparative analysis of the complete genome sequence of the plant growth-
RT promoting bacterium Bacillus amyloliquefaciens FZB42.";
RL Nat. Biotechnol. 25:1007-1014(2007).
CC -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of
CC DNA into RNA using the four ribonucleoside triphosphates as substrates.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.6; Evidence={ECO:0000255|HAMAP-Rule:MF_01321};
CC -!- SUBUNIT: The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta'
CC and 1 omega subunit. When a sigma factor is associated with the core
CC the holoenzyme is formed, which can initiate transcription.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
CC -!- SIMILARITY: Belongs to the RNA polymerase beta chain family.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
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DR EMBL; CP000560; ABS72555.1; -; Genomic_DNA.
DR AlphaFoldDB; A7Z0M9; -.
DR SMR; A7Z0M9; -.
DR STRING; 326423.RBAM_001320; -.
DR EnsemblBacteria; ABS72555; ABS72555; RBAM_001320.
DR KEGG; bay:RBAM_001320; -.
DR HOGENOM; CLU_000524_4_1_9; -.
DR OMA; FMTWEGY; -.
DR Proteomes; UP000001120; Chromosome.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0032549; F:ribonucleoside binding; IEA:InterPro.
DR GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR CDD; cd00653; RNA_pol_B_RPB2; 1.
DR Gene3D; 2.30.150.10; -; 1.
DR Gene3D; 2.40.270.10; -; 1.
DR Gene3D; 2.40.50.150; -; 1.
DR Gene3D; 3.90.1110.10; -; 1.
DR HAMAP; MF_01321; RNApol_bact_RpoB; 1.
DR InterPro; IPR042107; DNA-dir_RNA_pol_bsu_ext_1_sf.
DR InterPro; IPR019462; DNA-dir_RNA_pol_bsu_external_1.
DR InterPro; IPR015712; DNA-dir_RNA_pol_su2.
DR InterPro; IPR007120; DNA-dir_RNAP_su2_dom.
DR InterPro; IPR037033; DNA-dir_RNAP_su2_hyb_sf.
DR InterPro; IPR010243; RNA_pol_bsu_bac.
DR InterPro; IPR007121; RNA_pol_bsu_CS.
DR InterPro; IPR007644; RNA_pol_bsu_protrusion.
DR InterPro; IPR007642; RNA_pol_Rpb2_2.
DR InterPro; IPR037034; RNA_pol_Rpb2_2_sf.
DR InterPro; IPR007645; RNA_pol_Rpb2_3.
DR InterPro; IPR007641; RNA_pol_Rpb2_7.
DR InterPro; IPR014724; RNA_pol_RPB2_OB-fold.
DR PANTHER; PTHR20856; PTHR20856; 1.
DR Pfam; PF04563; RNA_pol_Rpb2_1; 1.
DR Pfam; PF04561; RNA_pol_Rpb2_2; 2.
DR Pfam; PF04565; RNA_pol_Rpb2_3; 1.
DR Pfam; PF10385; RNA_pol_Rpb2_45; 1.
DR Pfam; PF00562; RNA_pol_Rpb2_6; 1.
DR Pfam; PF04560; RNA_pol_Rpb2_7; 1.
DR TIGRFAMs; TIGR02013; rpoB; 1.
DR PROSITE; PS01166; RNA_POL_BETA; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase; Nucleotidyltransferase; Transcription;
KW Transferase.
FT CHAIN 1..1196
FT /note="DNA-directed RNA polymerase subunit beta"
FT /id="PRO_0000329165"
FT REGION 1152..1196
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1196 AA; 133820 MW; 14BF88ED2A7DAEA5 CRC64;
MNQLTGQLVQ YGRHRQRRSY ARISEVLELP NLIEIQTSSY QWFLDEGLRE MFQDISPIED
FTGNLSLEFI DYSLGDPKYP VEESKERDVT YSAPLRVKVR LINKETGEVK DQDVFMGDFP
IMTDTGTFII NGAERVIVSQ LVRSPSVYFS GKVDKNGKKG FTATVIPNRG AWLEYETDAK
DVVYVRIDRT RKLPVTVLLR ALGFGSDQEI LDLIGENEYL RNTLDKDNTE NSDKALLEIY
ERLRPGEPPT VENAKSLLDS RFFDPKRYDL ANVGRYKINK KLHIKNRLFN QRLAETLVDP
ETGEILAEKG QILDRRTLDK VLPYLENGIG FRKLYPNGGV VEDEVMLQSI KIYAPTDAEG
EQTINVIGNA YIEEAIKNIT PADIISSISY FFNLLHGVGD TDDIDHLGNR RLRSVGELLQ
NQFRIGLSRM ERVVRERMSI QDTNTITPQQ LINIRPVIAS IKEFFGSSQL SQFMDQTNPL
AELTHKRRLS ALGPGGLTRE RAGMEVRDVH YSHYGRMCPI ETPEGPNIGL INSLSSFAKV
NRFGFIETPY RRVDPETGKV TPRIDYLTAD EEDNYVVAQA NAKLSDDGSF LDDSIVARFR
GENTVVARNR VDYMDVSPKQ VVSAATACIP FLENDDSNRA LMGANMQRQA VPLMQPEAPI
VGTGMEYVSG KDSGAAVICK HPGIVERVEA KNVWVRRYEE IDGQKVKGNL DKYSLLKFVR
SNQGTCYNQR PIVSVGDEVV KGEILADGPS MELGELALGR NVMVGFMTWD GYNYEDAIIM
SERLVKDDVY TSIHIEEYES EARDTKLGPE EITRDIPNVG EDALRNLDDR GIIRIGAEVN
DGDLLVGKVT PKGVTELTAE ERLLHAIFGE KAREVRDTSL RVPHGGGGII HDVKVFNRED
GDELPPGVNQ LVRVYIVQKR KISEGDKMAG RHGNKGVISK ILPEEDMPYL PDGTPIDIML
NPLGVPSRMN IGQVLELHMG MAARYLGIHI ASPVFDGARE EDVWETLEEA GMSRDAKTVL
YDGRTGEPFD NRVSVGIMYM IKLAHMVDDK LHARSTGPYS LVTQQPLGGK AQFGGQRFGE
MEVWALEAYG AAYTLQEILT VKSDDVVGRV KTYEAIVKGD NVPEPGVPES FKVLIKELQS
LGMDVKILSG DEEEIEMRDL EDEEDAKQAD GLALSGDEAP EETASPDVER DAVTKE