RPOB_BUCAP
ID RPOB_BUCAP Reviewed; 1342 AA.
AC P41184;
DT 01-FEB-1995, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1995, sequence version 1.
DT 03-AUG-2022, entry version 126.
DE RecName: Full=DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};
DE AltName: Full=RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE AltName: Full=Transcriptase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
GN Name=rpoB {ECO:0000255|HAMAP-Rule:MF_01321}; OrderedLocusNames=BUsg_035;
OS Buchnera aphidicola subsp. Schizaphis graminum (strain Sg).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Erwiniaceae; Buchnera.
OX NCBI_TaxID=198804;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=1369199; DOI=10.1007/bf01575863;
RA Clark M.A., Baumann L., Baumann P.;
RT "Sequence analysis of an aphid endosymbiont DNA fragment containing rpoB
RT (beta-subunit of RNA polymerase) and portions of rplL and rpoC.";
RL Curr. Microbiol. 25:283-290(1992).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Sg;
RX PubMed=12089438; DOI=10.1126/science.1071278;
RA Tamas I., Klasson L., Canbaeck B., Naeslund A.K., Eriksson A.-S.,
RA Wernegreen J.J., Sandstroem J.P., Moran N.A., Andersson S.G.E.;
RT "50 million years of genomic stasis in endosymbiotic bacteria.";
RL Science 296:2376-2379(2002).
CC -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of
CC DNA into RNA using the four ribonucleoside triphosphates as substrates.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.6; Evidence={ECO:0000255|HAMAP-Rule:MF_01321};
CC -!- SUBUNIT: The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta'
CC and 1 omega subunit. When a sigma factor is associated with the core
CC the holoenzyme is formed, which can initiate transcription.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
CC -!- SIMILARITY: Belongs to the RNA polymerase beta chain family.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; Z11913; CAA77970.1; -; Genomic_DNA.
DR EMBL; AE013218; AAM67606.1; -; Genomic_DNA.
DR PIR; S32680; S32680.
DR RefSeq; WP_011053572.1; NC_004061.1.
DR AlphaFoldDB; P41184; -.
DR SMR; P41184; -.
DR STRING; 198804.BUsg_035; -.
DR PRIDE; P41184; -.
DR EnsemblBacteria; AAM67606; AAM67606; BUsg_035.
DR KEGG; bas:BUsg_035; -.
DR eggNOG; COG0085; Bacteria.
DR HOGENOM; CLU_000524_4_3_6; -.
DR OMA; FMTWEGY; -.
DR OrthoDB; 9601at2; -.
DR Proteomes; UP000000416; Chromosome.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0032549; F:ribonucleoside binding; IEA:InterPro.
DR GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR CDD; cd00653; RNA_pol_B_RPB2; 1.
DR Gene3D; 2.30.150.10; -; 1.
DR Gene3D; 2.40.270.10; -; 1.
DR Gene3D; 2.40.50.150; -; 1.
DR Gene3D; 3.90.1110.10; -; 1.
DR HAMAP; MF_01321; RNApol_bact_RpoB; 1.
DR InterPro; IPR042107; DNA-dir_RNA_pol_bsu_ext_1_sf.
DR InterPro; IPR019462; DNA-dir_RNA_pol_bsu_external_1.
DR InterPro; IPR015712; DNA-dir_RNA_pol_su2.
DR InterPro; IPR007120; DNA-dir_RNAP_su2_dom.
DR InterPro; IPR037033; DNA-dir_RNAP_su2_hyb_sf.
DR InterPro; IPR010243; RNA_pol_bsu_bac.
DR InterPro; IPR007121; RNA_pol_bsu_CS.
DR InterPro; IPR007644; RNA_pol_bsu_protrusion.
DR InterPro; IPR007642; RNA_pol_Rpb2_2.
DR InterPro; IPR037034; RNA_pol_Rpb2_2_sf.
DR InterPro; IPR007645; RNA_pol_Rpb2_3.
DR InterPro; IPR007641; RNA_pol_Rpb2_7.
DR InterPro; IPR014724; RNA_pol_RPB2_OB-fold.
DR PANTHER; PTHR20856; PTHR20856; 1.
DR Pfam; PF04563; RNA_pol_Rpb2_1; 1.
DR Pfam; PF04561; RNA_pol_Rpb2_2; 2.
DR Pfam; PF04565; RNA_pol_Rpb2_3; 1.
DR Pfam; PF10385; RNA_pol_Rpb2_45; 1.
DR Pfam; PF00562; RNA_pol_Rpb2_6; 1.
DR Pfam; PF04560; RNA_pol_Rpb2_7; 1.
DR TIGRFAMs; TIGR02013; rpoB; 1.
DR PROSITE; PS01166; RNA_POL_BETA; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase; Nucleotidyltransferase; Transcription;
KW Transferase.
FT CHAIN 1..1342
FT /note="DNA-directed RNA polymerase subunit beta"
FT /id="PRO_0000047873"
SQ SEQUENCE 1342 AA; 152061 MW; 7E30BC9E013D31ED CRC64;
MVYSYTEKKR IRKDFGKRPQ VLDIPYLLSI QLDSFKKFIK IDPEGLHGLE AAFRSVFPIC
GYNGNSELQY VSYRLGDAIF DVKECQIRGA TYSAPLRVRL RLVIYERDVL EPTVKDIKEQ
EVYMGEIPLM TNNGTFIING TERVVVSQLH RSPGVFFDSD KGKTHSSGKV LYNARIIPYR
GSWLDFEFDP KDNLFVRIDR RRKLPVTIIL RALNYNTEEI LNLFFEKNIF NINNNKIQLE
LVSERLRGET ASFDIKKNGK IYVKKGRRIT AKHIQELKKD KINSITVPVE YILGRIVSKN
YLDPKTGETI ILANTELSLE ILTKLKNSSF FSIETLFTND LDHGPYISET LRIDSSHDRI
SALMEIYRVM RPGEPLTKEA TENLFENLFF SEDRYDLSSV GRMKFNRSLL RKKIEGVSTL
NKEDIIDVIK KLIDIRNGKG EVDDIDHLGN RRIRSVGEMA ENQFRIGLVR VERAVKERLS
VGDLDTLMPQ DMINAKPISA AIKEFFGSSQ LSQFMDQNNP LSEITHKRRI SALGLGGLTR
ERAGFEVRDV HPTHYGRVCP IETPEGPNIG LINSLSVYAR TNSYGFLETP YRKVHNRLVT
DEIHYLSAIE EGNYVIAQAN TNIDKNNYFI DDLVTCRHKG ESSLFNCNQV DYMDVSTQQI
VSVGASLIPF LEHDDANRAL MGANMQRQAV PTLKTDKPLV GTGMERAVAV DSGVTVVAKR
GGIIQYIDAS RIIIKVNEEE TYTGEAGIDI YNLTKYTRSN QNTCINQKPC VKLREKINKN
DVLADGPSTD LGELALGQNM RVAFMPWNGY NFEDSILVSE KVVQEDRFTT IHIQELSCIS
RDTKLGPEEI SSDIPNVGEA ALSKLDESGI VYIGAEVTGG DILVGKVTPK GETQLTPEEK
LLRAIFGEKA SDVKDSSLRV PNGVSGTVID VQIFTRDGVK KDKRALEIEN MQLKKAKKDL
TEEFKIFELS LFSRIKKTLV SFNIKEDFLN KLPYEKWFKI DIQDRNKKKE IEKLLQQHNQ
LKKEFEKKIE VKRRKITQGD DLAPGVLKIV KVYLAVKRQI QPGDKMAGRH GNKGVISKIN
PVEDMPYDEN GIPVDIVLNP LGVPSRMNIG QILETHLGMA AKGIGNKINN MLKKQEKISN
LKKFIQKAFD LGENLRQKVN LDDFSNEEIL DLAKNLKKGM PISTPVFDGA QENEIKQMLK
FSNLPTSGQI SLFDGRTGEK FERPVTVGYM YMLKLNHLVD DKMHARSTGS YSLVTQQPLG
GKAQFGGQRF GEMEVWALEA YGASYTLQEM LTVKSDDVNG RTKMYKNIVD GNHQMEPGMP
ESFNVLLKEI RSLGINIELE NE