RPOB_CHLTE
ID RPOB_CHLTE Reviewed; 1303 AA.
AC Q8KG15;
DT 16-JAN-2004, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2002, sequence version 1.
DT 03-AUG-2022, entry version 106.
DE RecName: Full=DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};
DE AltName: Full=RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE AltName: Full=Transcriptase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
GN Name=rpoB {ECO:0000255|HAMAP-Rule:MF_01321}; OrderedLocusNames=CT0155;
OS Chlorobaculum tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 / TLS)
OS (Chlorobium tepidum).
OC Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobaculum.
OX NCBI_TaxID=194439;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 49652 / DSM 12025 / NBRC 103806 / TLS;
RX PubMed=12093901; DOI=10.1073/pnas.132181499;
RA Eisen J.A., Nelson K.E., Paulsen I.T., Heidelberg J.F., Wu M., Dodson R.J.,
RA DeBoy R.T., Gwinn M.L., Nelson W.C., Haft D.H., Hickey E.K., Peterson J.D.,
RA Durkin A.S., Kolonay J.F., Yang F., Holt I.E., Umayam L.A., Mason T.M.,
RA Brenner M., Shea T.P., Parksey D.S., Nierman W.C., Feldblyum T.V.,
RA Hansen C.L., Craven M.B., Radune D., Vamathevan J.J., Khouri H.M.,
RA White O., Gruber T.M., Ketchum K.A., Venter J.C., Tettelin H., Bryant D.A.,
RA Fraser C.M.;
RT "The complete genome sequence of Chlorobium tepidum TLS, a photosynthetic,
RT anaerobic, green-sulfur bacterium.";
RL Proc. Natl. Acad. Sci. U.S.A. 99:9509-9514(2002).
CC -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of
CC DNA into RNA using the four ribonucleoside triphosphates as substrates.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.6; Evidence={ECO:0000255|HAMAP-Rule:MF_01321};
CC -!- SUBUNIT: The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta'
CC and 1 omega subunit. When a sigma factor is associated with the core
CC the holoenzyme is formed, which can initiate transcription.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
CC -!- SIMILARITY: Belongs to the RNA polymerase beta chain family.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
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DR EMBL; AE006470; AAM71403.1; -; Genomic_DNA.
DR RefSeq; NP_661061.1; NC_002932.3.
DR AlphaFoldDB; Q8KG15; -.
DR SMR; Q8KG15; -.
DR STRING; 194439.CT0155; -.
DR EnsemblBacteria; AAM71403; AAM71403; CT0155.
DR KEGG; cte:CT0155; -.
DR PATRIC; fig|194439.7.peg.152; -.
DR eggNOG; COG0085; Bacteria.
DR HOGENOM; CLU_000524_4_0_10; -.
DR OMA; FMTWEGY; -.
DR OrthoDB; 9601at2; -.
DR Proteomes; UP000001007; Chromosome.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0032549; F:ribonucleoside binding; IEA:InterPro.
DR GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR CDD; cd00653; RNA_pol_B_RPB2; 1.
DR Gene3D; 2.30.150.10; -; 1.
DR Gene3D; 2.40.270.10; -; 2.
DR Gene3D; 2.40.50.150; -; 1.
DR Gene3D; 3.90.1110.10; -; 2.
DR HAMAP; MF_01321; RNApol_bact_RpoB; 1.
DR InterPro; IPR042107; DNA-dir_RNA_pol_bsu_ext_1_sf.
DR InterPro; IPR019462; DNA-dir_RNA_pol_bsu_external_1.
DR InterPro; IPR015712; DNA-dir_RNA_pol_su2.
DR InterPro; IPR007120; DNA-dir_RNAP_su2_dom.
DR InterPro; IPR037033; DNA-dir_RNAP_su2_hyb_sf.
DR InterPro; IPR010243; RNA_pol_bsu_bac.
DR InterPro; IPR007121; RNA_pol_bsu_CS.
DR InterPro; IPR007644; RNA_pol_bsu_protrusion.
DR InterPro; IPR007642; RNA_pol_Rpb2_2.
DR InterPro; IPR037034; RNA_pol_Rpb2_2_sf.
DR InterPro; IPR007645; RNA_pol_Rpb2_3.
DR InterPro; IPR007641; RNA_pol_Rpb2_7.
DR InterPro; IPR014724; RNA_pol_RPB2_OB-fold.
DR PANTHER; PTHR20856; PTHR20856; 1.
DR Pfam; PF04563; RNA_pol_Rpb2_1; 1.
DR Pfam; PF04561; RNA_pol_Rpb2_2; 3.
DR Pfam; PF04565; RNA_pol_Rpb2_3; 1.
DR Pfam; PF10385; RNA_pol_Rpb2_45; 1.
DR Pfam; PF00562; RNA_pol_Rpb2_6; 1.
DR Pfam; PF04560; RNA_pol_Rpb2_7; 1.
DR TIGRFAMs; TIGR02013; rpoB; 1.
DR PROSITE; PS01166; RNA_POL_BETA; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase; Nucleotidyltransferase; Reference proteome;
KW Transcription; Transferase.
FT CHAIN 1..1303
FT /note="DNA-directed RNA polymerase subunit beta"
FT /id="PRO_0000047881"
SQ SEQUENCE 1303 AA; 145469 MW; 365DF70F97A2042C CRC64;
MKVADATPTP CIDFSKIQSI INPPDLLKVQ LDSFHNFIQD SVPLEKRKDQ GLEKVLRSAF
PITDTRGLYL LEYISYSFDK PKYTVEECIE RGLTYDVSLK IKLKLSYKDE ADEPDWKETI
QQEVYLGRIP YMTDRGTFII NGAERVVVAQ LHRSPGVVFS EAVHPNGKKM YSAKIVPTRG
SWIEFQTDIN NQIFVYIDQK KNFLVTALLR AIGFAKDEDI LGLFDLVEEV EVSSKSSKRE
QLLGQYLASD IIDMTTGEVV PARAAITEEI IDQIVAAGYK TVKVMKTTSP EKGVDKSVII
NTILNDSSAT EEEALEIVYE ELRSNEAPDI DAARSFLERT FFNQKKYDLG DVGRYRIQKK
LQNELAELSA YLEKRPELKE LSDAIYERIL QTISTYSEEP IGEDILVLTH YDIIAVINYL
IKLINGMAEV DDVDHLANRR VRSVGEQLAA QFVIGLARMG KNVREKLNSR DTDKIAPADL
INARTVSSVV SSFFATSQLS QFMDQTNPLA EMTNKRRVSA LGPGGLTRER AGFEVRDVHY
THYGRLCPIE TPEGPNIGLI SSLSVYAEIN DKGFIQTPYR VVENGQVTDK VVMLSAEDEE
NKITVPVSIE LDENNRIAAE SVQARTKGDY PLVLAEEVNY MDVSPVQIVS AAAALIPFLE
HDDGNRALMG ANMQRQAVPL LVSEAPIVGT GMEAKVARDS RAVIVAEGPG VVQCVTADRI
EVRYDLDPEN NTVSLLDPDE GVKVYKLIKF KRSNQDTCIS QRPLVHNGQR VNAGDVLADS
SSTDNGELAL GKNVLVAFMP WRGYNFEDAI VLSERLVYDD VFTSIHVHEF ESSVRDTKRG
EEQFTRDIYN VSEDALRNLD ENGIVRIGAE VKERDILVGK ITPKGESDPT PEEKLLRAIF
GDKSSDVKDA SMHVPAGMKG IVIKTKLFSR KKKIGMDVKE RMEAIDKQFD LKEADLRSRF
AKWMKQYLNG KKSVAITSDK GKVLVPEGTV IDEALLAKFN GLPFLESIDL SKGIVSGAKT
NENVVRLIRE YRLKLKDLSD ERENEKYKIN VGDELPPGIE ELAKVYIAQK RKIQVGDKMA
GRHGNKGVVG KILPIEDMPF MEDGTPVDIV LNPLGVPSRM NIGQLYETSL GWAGKKLGVK
FKTPIFSGAT YTEVQEYLEK AGLPGHGKVK LFDGRTGEQF HDEVTVGYIY MLKLSHLVDD
KIHARSIGPY SLITQQPLGG KAQFGGQRFG EMEVWALEAY GAANILREML TVKSDDVIGR
NKTYEAIVKG QNLPEPGTPE SFNVLIRELQ GLGLEIRIDD RVP