RPOB_EUGGR
ID RPOB_EUGGR Reviewed; 1082 AA.
AC P23579;
DT 01-NOV-1991, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1991, sequence version 1.
DT 03-AUG-2022, entry version 109.
DE RecName: Full=DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};
DE AltName: Full=PEP {ECO:0000255|HAMAP-Rule:MF_01321};
DE AltName: Full=Plastid-encoded RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE Short=RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
GN Name=rpoB {ECO:0000255|HAMAP-Rule:MF_01321};
OS Euglena gracilis.
OG Plastid; Chloroplast.
OC Eukaryota; Discoba; Euglenozoa; Euglenida; Spirocuta; Euglenophyceae;
OC Euglenales; Euglenaceae; Euglena.
OX NCBI_TaxID=3039;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=Z / UTEX 753;
RX PubMed=2110656; DOI=10.1093/nar/18.7.1869;
RA Yepiz-Plascencia G.M., Radebaugh C.A., Hallick R.B.;
RT "The Euglena gracilis chloroplast rpoB gene. Novel gene organization and
RT transcription of the RNA polymerase subunit operon.";
RL Nucleic Acids Res. 18:1869-1878(1990).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Z / UTEX 753;
RX PubMed=8346031; DOI=10.1093/nar/21.15.3537;
RA Hallick R.B., Hong L., Drager R.G., Favreau M.R., Monfort A., Orsat B.,
RA Spielmann A., Stutz E.;
RT "Complete sequence of Euglena gracilis chloroplast DNA.";
RL Nucleic Acids Res. 21:3537-3544(1993).
CC -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of
CC DNA into RNA using the four ribonucleoside triphosphates as substrates.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.6; Evidence={ECO:0000255|HAMAP-Rule:MF_01321};
CC -!- SUBUNIT: In plastids the minimal PEP RNA polymerase catalytic core is
CC composed of four subunits: alpha, beta, beta', and beta''. When a
CC (nuclear-encoded) sigma factor is associated with the core the
CC holoenzyme is formed, which can initiate transcription.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast.
CC -!- SIMILARITY: Belongs to the RNA polymerase beta chain family.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
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DR EMBL; X17191; CAA35052.1; -; Genomic_DNA.
DR EMBL; X70810; CAA50138.1; -; Genomic_DNA.
DR PIR; S09210; RNEGB.
DR RefSeq; NP_041951.1; NC_001603.2.
DR AlphaFoldDB; P23579; -.
DR SMR; P23579; -.
DR PRIDE; P23579; -.
DR GeneID; 807537; -.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0032549; F:ribonucleoside binding; IEA:InterPro.
DR GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR CDD; cd00653; RNA_pol_B_RPB2; 1.
DR Gene3D; 2.30.150.10; -; 1.
DR Gene3D; 2.40.270.10; -; 1.
DR Gene3D; 2.40.50.150; -; 1.
DR Gene3D; 3.90.1110.10; -; 1.
DR HAMAP; MF_01321; RNApol_bact_RpoB; 1.
DR InterPro; IPR042107; DNA-dir_RNA_pol_bsu_ext_1_sf.
DR InterPro; IPR015712; DNA-dir_RNA_pol_su2.
DR InterPro; IPR007120; DNA-dir_RNAP_su2_dom.
DR InterPro; IPR037033; DNA-dir_RNAP_su2_hyb_sf.
DR InterPro; IPR010243; RNA_pol_bsu_bac.
DR InterPro; IPR007121; RNA_pol_bsu_CS.
DR InterPro; IPR007642; RNA_pol_Rpb2_2.
DR InterPro; IPR037034; RNA_pol_Rpb2_2_sf.
DR InterPro; IPR007645; RNA_pol_Rpb2_3.
DR InterPro; IPR007641; RNA_pol_Rpb2_7.
DR InterPro; IPR014724; RNA_pol_RPB2_OB-fold.
DR PANTHER; PTHR20856; PTHR20856; 1.
DR Pfam; PF04561; RNA_pol_Rpb2_2; 1.
DR Pfam; PF04565; RNA_pol_Rpb2_3; 1.
DR Pfam; PF00562; RNA_pol_Rpb2_6; 1.
DR Pfam; PF04560; RNA_pol_Rpb2_7; 1.
DR PROSITE; PS01166; RNA_POL_BETA; 1.
PE 3: Inferred from homology;
KW Chloroplast; DNA-directed RNA polymerase; Nucleotidyltransferase; Plastid;
KW Transcription; Transferase.
FT CHAIN 1..1082
FT /note="DNA-directed RNA polymerase subunit beta"
FT /id="PRO_0000048022"
SQ SEQUENCE 1082 AA; 124532 MW; 27CD37CE308B22BA CRC64;
MVNGCRVRSN LLDIQRNSFR SFLKKGLVEE LRKIKDIAHE GFRISFQTDN VKYKKPKISA
EFALKNGETY SLSVHIPVEV TYNNMFLVRN KYILFAKIPL MTEKGTFIFN GNKRIMVNQI
IRSPGVYFEK NRYNDSIFAT LIPTFGSWLT FKIDQDEGIF VKVDKIKTAI PLINFLKCLG
LSRKKFFLYL NDPIFIETLQ ESESYGIRLE FFEFYKIFFP NEVNVRFGNA RKFLRSKFMD
PRKYDLGEVG RFRVNTKIYR SEFFQSNRTL QPEDVLGIAH YLIELKKGMI PFDEIDDLKN
KLVRSIGELL QSQFRIILNE LESSLKEKLI FLYKNPSEKT FRLSRFFNSY FITNRIRKFF
SVNPLSQLLD DTNSLSELTH KRKLSPFGPN GLNKERTKLD VREINTSQYG RVCPIETSEG
KNAGLILSLA KDVRVDKYGF LESPFYKVLR GKIETNKGIY FISSAQEKYF TVAPFDVFRS
SQSNLLDKNK LLGVKRSKIF SYSFSKNIDF ISISTDQFTS LGTGLVPFLE HNDANRVLMG
SNMQRQSLIL LEKEVPFIKT GREALINRES DATVLAKSSG KVIYSSLKKI VIQEEEYCAN
IEFFNKNYSF FNLLGCLNEI SQKNFKLIKK VNQKIYFLES PKKSNHGVYI QKIPIVHEGE
WVRKGQIIAD GMSTLRGGIC LGKNVLVAYL GWEGYNFEDA VIISERLVFE DIFTSIHMKK
FKTFIVNDEK KGENISMFIP NASLKTIKNL KNNGIIKIGS EIKAQDVLIG RIKVKLKNTP
KNKMLIAFFG NKVRKDVSLR SPRSLVGIVT SVEILCKKSN CSVLIHVAEK RRIQIGDKIA
GRHGNKGIIS KIVPSIDMPF LPDGTPVDMI LNPLGIPSRM NVGQVFESLL NLSSLFLKER
YKIQPFDEVQ TSMNSKSFVY KKLNEARKRT KKDWLFNPNY PGKAFLYDGR NCRPFDHPVA
FGYAYILKLI HMVKDKIHAR VTGPYSSVTQ QPLRGKSKNG GQRFGEMEVW AIEGFGAAYL
LQELLTIKSD DVLNRSEALF SLINGTYFSK PNIPEAFKLF ILEMQSLCID IKIFTNNYKK
FD