RPOB_EXISA
ID RPOB_EXISA Reviewed; 1182 AA.
AC C4KZQ4;
DT 22-SEP-2009, integrated into UniProtKB/Swiss-Prot.
DT 07-JUL-2009, sequence version 1.
DT 03-AUG-2022, entry version 76.
DE RecName: Full=DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};
DE AltName: Full=RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE AltName: Full=Transcriptase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
GN Name=rpoB {ECO:0000255|HAMAP-Rule:MF_01321}; OrderedLocusNames=EAT1b_1641;
OS Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b).
OC Bacteria; Firmicutes; Bacilli; Bacillales;
OC Bacillales Family XII. Incertae Sedis; Exiguobacterium;
OC unclassified Exiguobacterium.
OX NCBI_TaxID=360911;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-1283 / AT1b;
RX PubMed=21460088; DOI=10.1128/jb.00303-11;
RA Vishnivetskaya T.A., Lucas S., Copeland A., Lapidus A., Glavina del Rio T.,
RA Dalin E., Tice H., Bruce D.C., Goodwin L.A., Pitluck S., Saunders E.,
RA Brettin T., Detter C., Han C., Larimer F., Land M.L., Hauser L.J.,
RA Kyrpides N.C., Ovchinnikova G., Kathariou S., Ramaley R.F., Rodrigues D.F.,
RA Hendrix C., Richardson P., Tiedje J.M.;
RT "Complete genome sequence of the Thermophilic Bacterium Exiguobacterium sp.
RT AT1b.";
RL J. Bacteriol. 193:2880-2881(2011).
CC -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of
CC DNA into RNA using the four ribonucleoside triphosphates as substrates.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.6; Evidence={ECO:0000255|HAMAP-Rule:MF_01321};
CC -!- SUBUNIT: The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta'
CC and 1 omega subunit. When a sigma factor is associated with the core
CC the holoenzyme is formed, which can initiate transcription.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
CC -!- SIMILARITY: Belongs to the RNA polymerase beta chain family.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
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DR EMBL; CP001615; ACQ70567.1; -; Genomic_DNA.
DR RefSeq; WP_012727685.1; NC_012673.1.
DR AlphaFoldDB; C4KZQ4; -.
DR SMR; C4KZQ4; -.
DR STRING; 360911.EAT1b_1641; -.
DR PRIDE; C4KZQ4; -.
DR EnsemblBacteria; ACQ70567; ACQ70567; EAT1b_1641.
DR KEGG; eat:EAT1b_1641; -.
DR eggNOG; COG0085; Bacteria.
DR HOGENOM; CLU_000524_4_1_9; -.
DR OMA; FMTWEGY; -.
DR OrthoDB; 9601at2; -.
DR Proteomes; UP000000716; Chromosome.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0032549; F:ribonucleoside binding; IEA:InterPro.
DR GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR CDD; cd00653; RNA_pol_B_RPB2; 1.
DR Gene3D; 2.30.150.10; -; 1.
DR Gene3D; 2.40.270.10; -; 1.
DR Gene3D; 2.40.50.150; -; 1.
DR Gene3D; 3.90.1110.10; -; 1.
DR HAMAP; MF_01321; RNApol_bact_RpoB; 1.
DR InterPro; IPR042107; DNA-dir_RNA_pol_bsu_ext_1_sf.
DR InterPro; IPR019462; DNA-dir_RNA_pol_bsu_external_1.
DR InterPro; IPR015712; DNA-dir_RNA_pol_su2.
DR InterPro; IPR007120; DNA-dir_RNAP_su2_dom.
DR InterPro; IPR037033; DNA-dir_RNAP_su2_hyb_sf.
DR InterPro; IPR010243; RNA_pol_bsu_bac.
DR InterPro; IPR007121; RNA_pol_bsu_CS.
DR InterPro; IPR007644; RNA_pol_bsu_protrusion.
DR InterPro; IPR007642; RNA_pol_Rpb2_2.
DR InterPro; IPR037034; RNA_pol_Rpb2_2_sf.
DR InterPro; IPR007645; RNA_pol_Rpb2_3.
DR InterPro; IPR007641; RNA_pol_Rpb2_7.
DR InterPro; IPR014724; RNA_pol_RPB2_OB-fold.
DR PANTHER; PTHR20856; PTHR20856; 1.
DR Pfam; PF04563; RNA_pol_Rpb2_1; 1.
DR Pfam; PF04561; RNA_pol_Rpb2_2; 2.
DR Pfam; PF04565; RNA_pol_Rpb2_3; 1.
DR Pfam; PF10385; RNA_pol_Rpb2_45; 1.
DR Pfam; PF00562; RNA_pol_Rpb2_6; 1.
DR Pfam; PF04560; RNA_pol_Rpb2_7; 1.
DR TIGRFAMs; TIGR02013; rpoB; 1.
DR PROSITE; PS01166; RNA_POL_BETA; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase; Nucleotidyltransferase; Reference proteome;
KW Transcription; Transferase.
FT CHAIN 1..1182
FT /note="DNA-directed RNA polymerase subunit beta"
FT /id="PRO_1000214478"
FT REGION 1150..1182
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1165..1182
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1182 AA; 131840 MW; 56AD4CDBE5B458DF CRC64;
MTGQLVQYGR HRQRRSFARI SEVLELPNLI EIQTASYEWF LREGLKEMFT DISPISDFTG
NLVLEFIDYS LSEPKYSIDE SKERDVTYSA PLRVKVRLQN KETGELKEQE VFMGDFPLMT
ESGTFIINGA ERVIVSQLVR SPSVYYNAKL DKNGKRGFGA TVIPNRGAWL ELETDAKDIV
YVRIDRTRKI PVTVLLRALG FGTDQEIIDL LGDDEYLRNT LEKDNTESTE KALIEIYERL
RPGEPPTVEN AKSLLVSRFF DPKRYDLANV GRYKMNKKLH LKNRLFGQKL AETLVDPETG
EVLAEAGTIL DRRNLDRILP HLENGLGYID AEPTGGVAEG EPFGLQSIKV ISPDDPDGER
ILNIIGNGNI DRSVKHITPA DIIASINYFF NLLHEVGTTD DIDHLGNRRL RSVGELLQNQ
FRIGLSRMER VVKERMSIQD QNAITPQALI NIRPVIASLK EFFGSSQLSQ FMDQTNPLAE
LTHKRRLSAL GPGGLTRERA GFEVRDVHYS HYGRMCPIET PEGPNIGLIN SLSSYAKVNE
YGFIEAPYRR VDPETGLVTG DIQYMTADEE DLYVVAQANM PLTEDGHFAD EQVLCRFRGQ
NLSVEPSRVD YMDVSPKQVV SAATACIPFL ENDDSNRALM GANMQRQAVP LLQPDSPIVG
TGMEYVSAKD SGAAIVAKHP GVVERVTARE ILIRRTSDVN GSEVSGDLDR YKLQKYVRSN
QGTCYNQKPI IAAGDRVEKG EILADGPSMD MGELALGRNV VVAFMTWDGY NYEDAIIMSE
RLVKDDVYTS IHIEEYESES RDTKLGPEEI TRDIPNVGDD ALRNLDDRGI IRIGAEVKDG
DILVGKVTPK GVTELTAEER LLHAIFGEKA REVRDTSLRV PNGGDGIILD VKVFDRENGD
ELSPGVNQMV RVYIVQKRKI HEGDKMAGRH GNKGVISRIL PEEDMPYMPD GTPVDIMLNP
LGVPSRMNIG QVLELHLGMA AKKLGIKVAT PVFDGAREED VWATIEEAGM DKDAKTRLYD
GRTGEPFDNR VSVGVMYMIK LAHMVDDKLH ARSTGPYSLV TQQPLGGKAQ FGGQRFGEME
VWALEAYGAA YTLQEILTIK SDDTVGRVKA YEAIVKGESV PKAGVPESFR VLIKELQALG
MEVKMMSADD EEVEMKDEDD DNIPNATSAL EQVVQPTVTE EE