RPOB_HETAK
ID RPOB_HETAK Reviewed; 1116 AA.
AC P36440;
DT 01-JUN-1994, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-1994, sequence version 1.
DT 03-AUG-2022, entry version 110.
DE RecName: Full=DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};
DE AltName: Full=PEP {ECO:0000255|HAMAP-Rule:MF_01321};
DE AltName: Full=Plastid-encoded RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE Short=RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
GN Name=rpoB {ECO:0000255|HAMAP-Rule:MF_01321};
OS Heterosigma akashiwo (Chromophytic alga) (Heterosigma carterae).
OG Plastid; Chloroplast.
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Raphidophyceae; Chattonellales;
OC Chattonellaceae; Heterosigma.
OX NCBI_TaxID=2829;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RA Mangahas J.L., Cattolico R.A., Reynolds A.E.;
RL Submitted (NOV-1993) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of
CC DNA into RNA using the four ribonucleoside triphosphates as substrates.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.6; Evidence={ECO:0000255|HAMAP-Rule:MF_01321};
CC -!- SUBUNIT: In plastids the minimal PEP RNA polymerase catalytic core is
CC composed of four subunits: alpha, beta, beta', and beta''. When a
CC (nuclear-encoded) sigma factor is associated with the core the
CC holoenzyme is formed, which can initiate transcription.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast.
CC -!- SIMILARITY: Belongs to the RNA polymerase beta chain family.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
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DR EMBL; X75815; CAA53450.1; -; Genomic_DNA.
DR PIR; S41915; S41915.
DR AlphaFoldDB; P36440; -.
DR SMR; P36440; -.
DR PRIDE; P36440; -.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0032549; F:ribonucleoside binding; IEA:InterPro.
DR GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR CDD; cd00653; RNA_pol_B_RPB2; 1.
DR Gene3D; 2.30.150.10; -; 1.
DR Gene3D; 2.40.270.10; -; 1.
DR Gene3D; 2.40.50.150; -; 1.
DR Gene3D; 3.90.1110.10; -; 1.
DR HAMAP; MF_01321; RNApol_bact_RpoB; 1.
DR InterPro; IPR042107; DNA-dir_RNA_pol_bsu_ext_1_sf.
DR InterPro; IPR019462; DNA-dir_RNA_pol_bsu_external_1.
DR InterPro; IPR015712; DNA-dir_RNA_pol_su2.
DR InterPro; IPR007120; DNA-dir_RNAP_su2_dom.
DR InterPro; IPR037033; DNA-dir_RNAP_su2_hyb_sf.
DR InterPro; IPR010243; RNA_pol_bsu_bac.
DR InterPro; IPR007121; RNA_pol_bsu_CS.
DR InterPro; IPR007642; RNA_pol_Rpb2_2.
DR InterPro; IPR037034; RNA_pol_Rpb2_2_sf.
DR InterPro; IPR007645; RNA_pol_Rpb2_3.
DR InterPro; IPR007641; RNA_pol_Rpb2_7.
DR InterPro; IPR014724; RNA_pol_RPB2_OB-fold.
DR PANTHER; PTHR20856; PTHR20856; 1.
DR Pfam; PF04561; RNA_pol_Rpb2_2; 1.
DR Pfam; PF04565; RNA_pol_Rpb2_3; 1.
DR Pfam; PF10385; RNA_pol_Rpb2_45; 1.
DR Pfam; PF00562; RNA_pol_Rpb2_6; 1.
DR Pfam; PF04560; RNA_pol_Rpb2_7; 1.
DR PROSITE; PS01166; RNA_POL_BETA; 1.
PE 3: Inferred from homology;
KW Chloroplast; DNA-directed RNA polymerase; Nucleotidyltransferase; Plastid;
KW Transcription; Transferase.
FT CHAIN 1..1116
FT /note="DNA-directed RNA polymerase subunit beta"
FT /id="PRO_0000048025"
FT REGION 1070..1116
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1070..1098
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1099..1116
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1116 AA; 125819 MW; EC6C83C81234435B CRC64;
MVNNTFITKL PDFLEIQRSS FCWFLLKGLS YELNSLSPII DVNVKRVKLK LYPQEFVLKP
GRTTPICAKQ NDSTYGVRIF LPAEVIYCDT ESKYPTKKNR LEDIKEKVFI GQIPLMTSTG
SFIVNGCEGY RNQIIRCPGL YYKAEFLNNN IVSTVTIIAQ RGSWLKFEFD KNGYWVRIDK
EKKISIFDFL EGLNINDEEI LSGLKSIAPL LKYKKTQEIL KRNNDPDLKN LIEKITDPNS
YSLGIIGRLN LNRRLGLNIS TRVHTLTIHD IFGIIDFFLS ARSFVPDDID DLRNRRIRAV
GELITSQCEI GLNRLERNIL ERTNFSGSVR ILPKTLVNAR PIMSAIQEFF NSSQLSHYMD
QTNLLSETAN KRRISALGPG GLNADRVTVA ARDIHPTQYG RLCPIETPEG QNVGLVSTLA
SYARINRNGF IQTPYFRVEN GKILTQQPLI YLTAEQENLK IAPADVKRDQ DGYLVDDFIV
TRFQSKNFII TPSKLVDFIS VSEIQIISVA ASLIPFLEHD DANRALMGAN MQRQAVPLLY
PRKPIVGTGI ESQVAFDSRL VNIATKPGIV KYVSSQQIDI KNIEGEKIAY KLIKYRPSNQ
DTCLNQRPLV WVGQSIKTGQ VIADGPGTQS GELALGQNLT VAYMPWQGYN YEDAILVSDK
LDIQNLFTSI HIEECETEVQ QTKTGEQVIT SDIPLVSEKN CKNLDENGII KVGKYVYPGD
ILVGKITPKG EIDQLPEAKL LKAIFGFKTP DMRDSSLRVP GGLSGRVLDI KIFKKPKPGK
VFGVGSKIRV FIAQISKLQV GDKIAGRHGN KGVISRILPH QDMPFLPDGT SVDIILNPLG
VPSRMNVGQI FECLLGLAGD QLNKRFKILP FDEMYQNEAS RILINQKLKD AAKKQNKPWL
FSAYSPGKIL LSDGRTGEKF DNPVLVGRSY ILKLAHLVED KIHARSTGPY SLITQQPVGG
KSQNGGQRFG EMEVWALEAF GAAYTLQELL TIKSDDMQGR DDVLNSIVCG QEIPKSSIPE
SFKVLMRELN ALGLDITTYK VMFENETNKN CLIKNEINLM QTYEEGIKAK IREEEKEREK
EREAREMEDP EKIVSKIDAK QKKKYKKTKK QTEKKK