位置:首页 > 蛋白库 > RPOB_LACDA
RPOB_LACDA
ID   RPOB_LACDA              Reviewed;        1221 AA.
AC   Q1GBM5;
DT   11-SEP-2007, integrated into UniProtKB/Swiss-Prot.
DT   27-JUN-2006, sequence version 1.
DT   03-AUG-2022, entry version 93.
DE   RecName: Full=DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE            Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE            EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};
DE   AltName: Full=RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE   AltName: Full=Transcriptase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
GN   Name=rpoB {ECO:0000255|HAMAP-Rule:MF_01321}; OrderedLocusNames=Ldb0386;
OS   Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081
OS   / BCRC 10696 / JCM 1002 / NBRC 13953 / NCIMB 11778 / NCTC 12712 / WDCM
OS   00102 / Lb 14).
OC   Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae;
OC   Lactobacillus.
OX   NCBI_TaxID=390333;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 11842 / DSM 20081 / BCRC 10696 / JCM 1002 / NBRC 13953 / NCIMB
RC   11778 / NCTC 12712 / WDCM 00102 / Lb 14;
RX   PubMed=16754859; DOI=10.1073/pnas.0603024103;
RA   van de Guchte M., Penaud S., Grimaldi C., Barbe V., Bryson K., Nicolas P.,
RA   Robert C., Oztas S., Mangenot S., Couloux A., Loux V., Dervyn R., Bossy R.,
RA   Bolotin A., Batto J.-M., Walunas T., Gibrat J.-F., Bessieres P.,
RA   Weissenbach J., Ehrlich S.D., Maguin E.;
RT   "The complete genome sequence of Lactobacillus bulgaricus reveals extensive
RT   and ongoing reductive evolution.";
RL   Proc. Natl. Acad. Sci. U.S.A. 103:9274-9279(2006).
CC   -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of
CC       DNA into RNA using the four ribonucleoside triphosphates as substrates.
CC       {ECO:0000255|HAMAP-Rule:MF_01321}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC         RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC         COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC         EC=2.7.7.6; Evidence={ECO:0000255|HAMAP-Rule:MF_01321};
CC   -!- SUBUNIT: The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta'
CC       and 1 omega subunit. When a sigma factor is associated with the core
CC       the holoenzyme is formed, which can initiate transcription.
CC       {ECO:0000255|HAMAP-Rule:MF_01321}.
CC   -!- SIMILARITY: Belongs to the RNA polymerase beta chain family.
CC       {ECO:0000255|HAMAP-Rule:MF_01321}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CR954253; CAI97221.1; -; Genomic_DNA.
DR   RefSeq; WP_011543638.1; NZ_JQAV01000001.1.
DR   AlphaFoldDB; Q1GBM5; -.
DR   SMR; Q1GBM5; -.
DR   STRING; 390333.Ldb0386; -.
DR   EnsemblBacteria; CAI97221; CAI97221; Ldb0386.
DR   KEGG; ldb:Ldb0386; -.
DR   PATRIC; fig|390333.7.peg.345; -.
DR   eggNOG; COG0085; Bacteria.
DR   HOGENOM; CLU_000524_4_1_9; -.
DR   OMA; FMTWEGY; -.
DR   BioCyc; LDEL390333:LDB_RS01640-MON; -.
DR   Proteomes; UP000001259; Chromosome.
DR   GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0032549; F:ribonucleoside binding; IEA:InterPro.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR   CDD; cd00653; RNA_pol_B_RPB2; 1.
DR   Gene3D; 2.30.150.10; -; 1.
DR   Gene3D; 2.40.270.10; -; 1.
DR   Gene3D; 2.40.50.150; -; 1.
DR   Gene3D; 3.90.1110.10; -; 1.
DR   HAMAP; MF_01321; RNApol_bact_RpoB; 1.
DR   InterPro; IPR042107; DNA-dir_RNA_pol_bsu_ext_1_sf.
DR   InterPro; IPR019462; DNA-dir_RNA_pol_bsu_external_1.
DR   InterPro; IPR015712; DNA-dir_RNA_pol_su2.
DR   InterPro; IPR007120; DNA-dir_RNAP_su2_dom.
DR   InterPro; IPR037033; DNA-dir_RNAP_su2_hyb_sf.
DR   InterPro; IPR010243; RNA_pol_bsu_bac.
DR   InterPro; IPR007121; RNA_pol_bsu_CS.
DR   InterPro; IPR007644; RNA_pol_bsu_protrusion.
DR   InterPro; IPR007642; RNA_pol_Rpb2_2.
DR   InterPro; IPR037034; RNA_pol_Rpb2_2_sf.
DR   InterPro; IPR007645; RNA_pol_Rpb2_3.
DR   InterPro; IPR007641; RNA_pol_Rpb2_7.
DR   InterPro; IPR014724; RNA_pol_RPB2_OB-fold.
DR   PANTHER; PTHR20856; PTHR20856; 1.
DR   Pfam; PF04563; RNA_pol_Rpb2_1; 1.
DR   Pfam; PF04561; RNA_pol_Rpb2_2; 2.
DR   Pfam; PF04565; RNA_pol_Rpb2_3; 1.
DR   Pfam; PF10385; RNA_pol_Rpb2_45; 1.
DR   Pfam; PF00562; RNA_pol_Rpb2_6; 1.
DR   Pfam; PF04560; RNA_pol_Rpb2_7; 1.
DR   TIGRFAMs; TIGR02013; rpoB; 1.
DR   PROSITE; PS01166; RNA_POL_BETA; 1.
PE   3: Inferred from homology;
KW   DNA-directed RNA polymerase; Nucleotidyltransferase; Reference proteome;
KW   Transcription; Transferase.
FT   CHAIN           1..1221
FT                   /note="DNA-directed RNA polymerase subunit beta"
FT                   /id="PRO_0000300331"
FT   REGION          1176..1221
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1187..1212
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1221 AA;  135844 MW;  3A6D3D929A5E60F1 CRC64;
     MLNGHVVNYG QHRTRRSFSR IKEILPLPNL TDVQTESYKW FLDEGVKEVF DDILPISDTS
     GRLTLEYVDY KLQEPKYTVD ESRKHDATYS APMHVTLKLT NHETGEIKTQ DVFFGDLPLM
     TKSGSFIVNG AERVIVSQLV RSPGVYYSGE FDKNGRQIFG TTVIPNRGAW LEFETDAKNI
     SYVRVDRTRK LPLSVLVRAL GFGSDSEIKE IFGDSDTLDL TLDKDVHKNP ADSRVAEALK
     DIYDRLRPGE PKTTDSSRSL LVSRFFDPRR YDLAAVGRYK VNKKLSLKNR LLGYTLAETL
     ADPGTGEVLA AKGTVVNNEV MDVLKDYLDR DDFKTVTYTP SDEGVIPEPV TVQEIKVFSR
     EIPDREIKLI SNGHIAEDVK CITPADIIAS VNYFLELQEG VGNIDDIDHL GNRRIRRVGE
     LLQNQMRIGL ARMERVVRER MSIQDAATVT PQQLINIRPI VGSIKEFFGS SQLSQFMDQN
     NPLGELTHKR RMSALGPGGL SRDRAGYEVR DVHYTHYGRL CPIETPEGPN IGLINSMATY
     AIINKYGFLE TPYRRVSWAT HKVTDKIDYL TADEEDNYII AGANTPLNED GSFVDDVILC
     RHREDNVEVS PDRIDYIDVI PKQVVSVTSA CIPFLENDDS NRALMGANHQ RQAVPLINPH
     GPLVATGMEY RAGHDSGDAL LAEADGEVEY VDANEIRVRR EDQTLDTYTL EKYRRSNATK
     NYNQTPNVKR GDKVVDGQVI ANGPSMADGE LALGQNPVIA FTTWNMYNFE DAIMLSERLV
     KEDVYTSIHI EDYDSEARDT KLGPEEITRE IPNVGEDALK DLDENGIIRI GAEVHDGDIL
     VGKVTPKGIT ELSAEERLLH AIFGEKAREV RDTSLRVPHG GGGVVQDVQV FTREAGDELA
     PGVNTLVRVY IVQKRKIQVG DKMSGRHGNK GTVALIAPVE DMPYLPDGTP VDICLNPMGV
     PSRMNIGQLL EIHLGRAARA LGIHVATPVF DGASEDDVWD FVREAGVDSD GKTVLYDGRT
     GEPFHNRVSV GVMYYLKLTH MVDDKIHARS IGPYSLVTQQ PLGGKAQFGG QRFGEMEVWA
     LEAYGAAYTL QEILTYKSDD VVGRVKAYEA IVKGERITKP GVPESFRVLV KELQSLGLDL
     RVLDSDENEV ELRDMDEDSN EHVNIDALSR LAEAQEKKKL AEEEAEIAAE AEAEGSAEGD
     AAEADADANE AETADDDKAS K
 
 
维奥蛋白资源库 - 中文蛋白资源 CopyRight © 2010-2024