RPOB_LEPIC
ID RPOB_LEPIC Reviewed; 1226 AA.
AC Q72UA8;
DT 30-AUG-2005, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 102.
DE RecName: Full=DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};
DE AltName: Full=RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE AltName: Full=Transcriptase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
GN Name=rpoB {ECO:0000255|HAMAP-Rule:MF_01321}; OrderedLocusNames=LIC_10753;
OS Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni
OS (strain Fiocruz L1-130).
OC Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.
OX NCBI_TaxID=267671;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Fiocruz L1-130;
RX PubMed=15028702; DOI=10.1128/jb.186.7.2164-2172.2004;
RA Nascimento A.L.T.O., Ko A.I., Martins E.A.L., Monteiro-Vitorello C.B.,
RA Ho P.L., Haake D.A., Verjovski-Almeida S., Hartskeerl R.A., Marques M.V.,
RA Oliveira M.C., Menck C.F.M., Leite L.C.C., Carrer H., Coutinho L.L.,
RA Degrave W.M., Dellagostin O.A., El-Dorry H., Ferro E.S., Ferro M.I.T.,
RA Furlan L.R., Gamberini M., Giglioti E.A., Goes-Neto A., Goldman G.H.,
RA Goldman M.H.S., Harakava R., Jeronimo S.M.B., Junqueira-de-Azevedo I.L.M.,
RA Kimura E.T., Kuramae E.E., Lemos E.G.M., Lemos M.V.F., Marino C.L.,
RA Nunes L.R., de Oliveira R.C., Pereira G.G., Reis M.S., Schriefer A.,
RA Siqueira W.J., Sommer P., Tsai S.M., Simpson A.J.G., Ferro J.A.,
RA Camargo L.E.A., Kitajima J.P., Setubal J.C., Van Sluys M.A.;
RT "Comparative genomics of two Leptospira interrogans serovars reveals novel
RT insights into physiology and pathogenesis.";
RL J. Bacteriol. 186:2164-2172(2004).
CC -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of
CC DNA into RNA using the four ribonucleoside triphosphates as substrates.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.6; Evidence={ECO:0000255|HAMAP-Rule:MF_01321};
CC -!- SUBUNIT: The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta'
CC and 1 omega subunit. When a sigma factor is associated with the core
CC the holoenzyme is formed, which can initiate transcription.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
CC -!- SIMILARITY: Belongs to the RNA polymerase beta chain family.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
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DR EMBL; AE016823; AAS69370.1; -; Genomic_DNA.
DR RefSeq; WP_000274334.1; NC_005823.1.
DR AlphaFoldDB; Q72UA8; -.
DR SMR; Q72UA8; -.
DR PaxDb; Q72UA8; -.
DR EnsemblBacteria; AAS69370; AAS69370; LIC_10753.
DR GeneID; 61144093; -.
DR KEGG; lic:LIC_10753; -.
DR HOGENOM; CLU_000524_4_3_12; -.
DR OMA; FMTWEGY; -.
DR Proteomes; UP000007037; Chromosome I.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0032549; F:ribonucleoside binding; IEA:InterPro.
DR GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR CDD; cd00653; RNA_pol_B_RPB2; 1.
DR Gene3D; 2.30.150.10; -; 1.
DR Gene3D; 2.40.270.10; -; 1.
DR Gene3D; 2.40.50.150; -; 1.
DR Gene3D; 3.90.1110.10; -; 1.
DR HAMAP; MF_01321; RNApol_bact_RpoB; 1.
DR InterPro; IPR042107; DNA-dir_RNA_pol_bsu_ext_1_sf.
DR InterPro; IPR019462; DNA-dir_RNA_pol_bsu_external_1.
DR InterPro; IPR015712; DNA-dir_RNA_pol_su2.
DR InterPro; IPR007120; DNA-dir_RNAP_su2_dom.
DR InterPro; IPR037033; DNA-dir_RNAP_su2_hyb_sf.
DR InterPro; IPR010243; RNA_pol_bsu_bac.
DR InterPro; IPR007121; RNA_pol_bsu_CS.
DR InterPro; IPR007644; RNA_pol_bsu_protrusion.
DR InterPro; IPR007642; RNA_pol_Rpb2_2.
DR InterPro; IPR037034; RNA_pol_Rpb2_2_sf.
DR InterPro; IPR007645; RNA_pol_Rpb2_3.
DR InterPro; IPR007641; RNA_pol_Rpb2_7.
DR InterPro; IPR014724; RNA_pol_RPB2_OB-fold.
DR PANTHER; PTHR20856; PTHR20856; 1.
DR Pfam; PF04563; RNA_pol_Rpb2_1; 1.
DR Pfam; PF04561; RNA_pol_Rpb2_2; 1.
DR Pfam; PF04565; RNA_pol_Rpb2_3; 1.
DR Pfam; PF10385; RNA_pol_Rpb2_45; 1.
DR Pfam; PF00562; RNA_pol_Rpb2_6; 2.
DR Pfam; PF04560; RNA_pol_Rpb2_7; 1.
DR TIGRFAMs; TIGR02013; rpoB; 1.
DR PROSITE; PS01166; RNA_POL_BETA; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase; Nucleotidyltransferase; Transcription;
KW Transferase.
FT CHAIN 1..1226
FT /note="DNA-directed RNA polymerase subunit beta"
FT /id="PRO_0000047911"
SQ SEQUENCE 1226 AA; 137767 MW; 090E5D43B82B601A CRC64;
MYGQVERKRV NFGKITNLDY LPNLIQIQKR SFDWFLQADV KDETKRRHQG LEAVFRETFP
IESPNNDMIM EYSHYILGEP KRSPQECKDT DATFAMPLKA VIRLIIKETG EIREQTVYMG
DLPVMTEQGT FIINGAERVV VSQLHRSPGI FFSYDMERDV FSARVIPYRG SWLEFEMDNK
GILIAKIDRK KKFPATLLVK SLGHGTNEEV LRLFYSSKKE KIAGATSKDL KKILGRRTIN
DIINMETGEV MLEAGSKINE DNISILKEMK VKEVELIEFP KGKDNPILIN ALEKDGVNDY
EDAILKFHSL MRQGEPSTIE NATTELTRLF FSPKTFDLGE VGRYKINSKF EFNNPKEFSG
EKSRVLRPAD IIETVRYILN LFSETENYYP DDIDHLGNRR IRSVGELISN QLKTGFSRVE
RVIKERMTVQ EIETQTPQLL ISIKPITAVI NEFFGSSQLS QFMDQTNPLA ELTHKRRLNA
LGPGGLSRDR AGMEVRDVHY SHYGRMCPIE TPEGPNIGLI LSMSSYARVN DYGFLETPYR
TVKNGKVTGQ IEHLTADKEE YHYIAQASGV IDEKGELKNK LISTRHRGDF PFRNPSEIQY
MDLAPLQVVS VSTALIPFLE HDDANRALMG SNMQRQAVPL LREEAPFVGT GMETRAAYDS
RICIVNKHDG VVTSVDAENI VVERKGGKES DTYQLTKFKK TNQGTCFNQK PIVGVVHSEI
NGKVSKVSKE KIEVTGENGE LKEYVLQIGS KQYSPIVSAG EEVKRGSTLA GQVVVGEKLD
EMGNILVKGT VLADGPAVDN GVLALGRNVL AAFMPWEGYN FEDAILISER IVRDDVFSSI
HIEEFEIQAR ETKLGPEQIT RDIPNLSDKA FRDLDETGVI RIGAEVKPGD ILVGMVTPKG
ETDLTPEYKL LHSIFGEKAK DVRDSSLRMP NGFEGTVIDI KRFSRENQDE LPAGVEEMVK
VFVARKRKLL VGDKMAGRHG NKGVVARVMA EEDMPYMEDG TPLDIVLNPL GVPSRMNLGQ
IFETQLGFAA SKLGISFETP VFDGAEESDV DNFCKEANLP LNSKFKLYDG RTGLPFMNEV
FCGYIYILKL AHLVEDKIHA RSTGPYSLVT QQPLGGKAQF GGQRLGEMEV WALEAYGASH
TLQELLTIKS DDMLGRARIY EAIVKGIHSI KPGIPESFNV LVQELRGLAL DIIITDSEGN
TVDISDYEDE YSKSKKKIKF ETIENA