RPOB_PHYAS
ID RPOB_PHYAS Reviewed; 1240 AA.
AC B1VAM6;
DT 14-APR-2009, integrated into UniProtKB/Swiss-Prot.
DT 20-MAY-2008, sequence version 1.
DT 03-AUG-2022, entry version 76.
DE RecName: Full=DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};
DE AltName: Full=RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE AltName: Full=Transcriptase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
GN Name=rpoB {ECO:0000255|HAMAP-Rule:MF_01321}; OrderedLocusNames=PA0665;
OS Phytoplasma australiense.
OC Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae;
OC Candidatus Phytoplasma; 16SrXII (Stolbur group).
OX NCBI_TaxID=59748;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=18359806; DOI=10.1128/jb.01301-07;
RA Tran-Nguyen L.T., Kube M., Schneider B., Reinhardt R., Gibb K.S.;
RT "Comparative genome analysis of 'Candidatus Phytoplasma australiense'
RT (subgroup tuf-Australia I; rp-A) and 'Ca. Phytoplasma asteris' strains OY-M
RT and AY-WB.";
RL J. Bacteriol. 190:3979-3991(2008).
CC -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of
CC DNA into RNA using the four ribonucleoside triphosphates as substrates.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.6; Evidence={ECO:0000255|HAMAP-Rule:MF_01321};
CC -!- SUBUNIT: The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta'
CC and 1 omega subunit. When a sigma factor is associated with the core
CC the holoenzyme is formed, which can initiate transcription.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
CC -!- SIMILARITY: Belongs to the RNA polymerase beta chain family.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
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DR EMBL; AM422018; CAM11999.1; -; Genomic_DNA.
DR RefSeq; WP_012359127.1; NC_010544.1.
DR AlphaFoldDB; B1VAM6; -.
DR SMR; B1VAM6; -.
DR STRING; 59748.PA0665; -.
DR PRIDE; B1VAM6; -.
DR EnsemblBacteria; CAM11999; CAM11999; PA0665.
DR KEGG; pal:PA0665; -.
DR eggNOG; COG0085; Bacteria.
DR OMA; FMTWEGY; -.
DR BRENDA; 2.7.7.6; 28560.
DR Proteomes; UP000008323; Chromosome.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0032549; F:ribonucleoside binding; IEA:InterPro.
DR GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR CDD; cd00653; RNA_pol_B_RPB2; 1.
DR Gene3D; 2.40.270.10; -; 3.
DR Gene3D; 3.90.1110.10; -; 1.
DR HAMAP; MF_01321; RNApol_bact_RpoB; 1.
DR InterPro; IPR019462; DNA-dir_RNA_pol_bsu_external_1.
DR InterPro; IPR015712; DNA-dir_RNA_pol_su2.
DR InterPro; IPR007120; DNA-dir_RNAP_su2_dom.
DR InterPro; IPR037033; DNA-dir_RNAP_su2_hyb_sf.
DR InterPro; IPR010243; RNA_pol_bsu_bac.
DR InterPro; IPR007121; RNA_pol_bsu_CS.
DR InterPro; IPR007644; RNA_pol_bsu_protrusion.
DR InterPro; IPR007642; RNA_pol_Rpb2_2.
DR InterPro; IPR037034; RNA_pol_Rpb2_2_sf.
DR InterPro; IPR007645; RNA_pol_Rpb2_3.
DR InterPro; IPR007641; RNA_pol_Rpb2_7.
DR PANTHER; PTHR20856; PTHR20856; 1.
DR Pfam; PF04563; RNA_pol_Rpb2_1; 1.
DR Pfam; PF04561; RNA_pol_Rpb2_2; 2.
DR Pfam; PF04565; RNA_pol_Rpb2_3; 1.
DR Pfam; PF10385; RNA_pol_Rpb2_45; 1.
DR Pfam; PF00562; RNA_pol_Rpb2_6; 1.
DR Pfam; PF04560; RNA_pol_Rpb2_7; 1.
DR TIGRFAMs; TIGR02013; rpoB; 1.
DR PROSITE; PS01166; RNA_POL_BETA; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase; Nucleotidyltransferase; Reference proteome;
KW Transcription; Transferase.
FT CHAIN 1..1240
FT /note="DNA-directed RNA polymerase subunit beta"
FT /id="PRO_1000141717"
SQ SEQUENCE 1240 AA; 140223 MW; 9B9C48132A0058D0 CRC64;
MAYRNVKYGK KVERRNYSKI IYDVDLPNLI EIQNKSFNWF LKDGIEELLQ DFCPIESYNG
DLKIYFGECY STGPKYSVEE SKTKDASYVI QLFVKATLEN TLTGETKKSS VLLTELPLIT
DTGTFIINGK ERVAVSQIVR SSSVYYSSTF DVKLNKNLYS GQVIPARGAW IEYEEGSKEI
LYVKLDRSKK IPLSNFIYAL GFNNREIIEK VFGKSPLLNS SFVKEEDMDT GNALIELYSK
IRQGEKVPVD TARDFIRKRL FDQKKYDLTT VGRYKFNKKL DVLARAEKTY LVHDFVNLET
KEIILPKHTF LTKDKIEILR KNRHFLLQEL FDAQHNLENE TDEEILTYKK DPQSRELYIK
TNILNFRTGE IIFPKDTLVT DEVIKRLRKS IQLLDGKVIE FFLRSKDVYQ KDLERTGVFN
EILEVYLSKD EHDNLQHKVQ IVGNNQKETK KHITLSDIIA SISYYLNLYE GIGNVDDIDH
LGNRRLRLIG ELLKNQFRIG LTRAEKHIKD MISVSKFSEV GPGELVNFGF LNGVIKTFFA
NSRLSQFMDQ INPLAELTQK RRVSALGVGG INRDRAGVEV RDVHNSHYGR LCPIETPEGP
SIGLIASLAI YAKVDDYGFI QTPFFKVFVQ NGASYVSNQI EYLTADQEKE EIIASSGYEL
NSDATFQKDK VIARKNGEIG IYPKEQVTYA DISPKQIVSI ATASIPFLEH NDSSRALMGS
NMQRQAVPLL VTESPIVGTG IEYRAAKDSG SLIIASQPGI VTYVDAKKIV TSDQEGNKKE
YQLTTFEKSN QDTLILQKPI VSLGDNIQKG DILVDGPSTN QGELALGRNI LVAFMTWEGY
NYEDAIIISE ELVKNDVYTS VHINKYSVQT RELKKGSGKE EITREVPNVG ADAIKNLDER
GIIIPGSEVK EGDILVGKIT PQGNVDPTPQ EKLIQIVIGE KAREYKDSSL RVPYGEGGIV
QSVQYFSRKN GDILPPGVNE NIRVFIAKKR KISEGDKMAG RHGNKGVISR ILPKEDLPFM
EDGTTIDVML NPLGVPSRMN IGQILEIHLG MSAKNLNIKV ATPVFDGVND QDLKEISQEA
NLELDGKKVL YDGRTGEPYE NRISVGVMYM IKLSHMVDDK LHARNVGPYT LVTQQPMRGK
IREGGQRYGE MENWAVHAHG AAYTLQEFLT IKSDDIIGRN QTYSAIVQGK QLPKPNIPES
FRVLIKELQA LGLYVELIKT DTKENEVNKS LIDYKKEGYN