RPOB_PHYMT
ID RPOB_PHYMT Reviewed; 1273 AA.
AC B3QZH0;
DT 28-JUL-2009, integrated into UniProtKB/Swiss-Prot.
DT 02-SEP-2008, sequence version 1.
DT 03-AUG-2022, entry version 74.
DE RecName: Full=DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};
DE AltName: Full=RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE AltName: Full=Transcriptase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
GN Name=rpoB {ECO:0000255|HAMAP-Rule:MF_01321}; OrderedLocusNames=ATP_00390;
OS Phytoplasma mali (strain AT).
OC Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae;
OC Candidatus Phytoplasma; 16SrX (Apple proliferation group).
OX NCBI_TaxID=482235;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AT;
RX PubMed=18582369; DOI=10.1186/1471-2164-9-306;
RA Kube M., Schneider B., Kuhl H., Dandekar T., Heitmann K., Migdoll A.M.,
RA Reinhardt R., Seemueller E.;
RT "The linear chromosome of the plant-pathogenic mycoplasma 'Candidatus
RT Phytoplasma mali'.";
RL BMC Genomics 9:306-306(2008).
CC -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of
CC DNA into RNA using the four ribonucleoside triphosphates as substrates.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.6; Evidence={ECO:0000255|HAMAP-Rule:MF_01321};
CC -!- SUBUNIT: The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta'
CC and 1 omega subunit. When a sigma factor is associated with the core
CC the holoenzyme is formed, which can initiate transcription.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
CC -!- SIMILARITY: Belongs to the RNA polymerase beta chain family.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
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DR EMBL; CU469464; CAP18577.1; -; Genomic_DNA.
DR AlphaFoldDB; B3QZH0; -.
DR SMR; B3QZH0; -.
DR STRING; 37692.ATP_00390; -.
DR EnsemblBacteria; CAP18577; CAP18577; ATP_00390.
DR KEGG; pml:ATP_00390; -.
DR eggNOG; COG0085; Bacteria.
DR HOGENOM; CLU_000524_4_3_14; -.
DR OMA; FMTWEGY; -.
DR BRENDA; 2.7.7.6; 14242.
DR Proteomes; UP000002020; Chromosome.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0032549; F:ribonucleoside binding; IEA:InterPro.
DR GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR CDD; cd00653; RNA_pol_B_RPB2; 1.
DR Gene3D; 2.30.150.10; -; 1.
DR Gene3D; 2.40.270.10; -; 3.
DR HAMAP; MF_01321; RNApol_bact_RpoB; 1.
DR InterPro; IPR042107; DNA-dir_RNA_pol_bsu_ext_1_sf.
DR InterPro; IPR019462; DNA-dir_RNA_pol_bsu_external_1.
DR InterPro; IPR015712; DNA-dir_RNA_pol_su2.
DR InterPro; IPR007120; DNA-dir_RNAP_su2_dom.
DR InterPro; IPR037033; DNA-dir_RNAP_su2_hyb_sf.
DR InterPro; IPR010243; RNA_pol_bsu_bac.
DR InterPro; IPR007121; RNA_pol_bsu_CS.
DR InterPro; IPR007644; RNA_pol_bsu_protrusion.
DR InterPro; IPR007642; RNA_pol_Rpb2_2.
DR InterPro; IPR007645; RNA_pol_Rpb2_3.
DR InterPro; IPR007641; RNA_pol_Rpb2_7.
DR PANTHER; PTHR20856; PTHR20856; 1.
DR Pfam; PF04563; RNA_pol_Rpb2_1; 1.
DR Pfam; PF04561; RNA_pol_Rpb2_2; 2.
DR Pfam; PF04565; RNA_pol_Rpb2_3; 1.
DR Pfam; PF10385; RNA_pol_Rpb2_45; 1.
DR Pfam; PF00562; RNA_pol_Rpb2_6; 1.
DR Pfam; PF04560; RNA_pol_Rpb2_7; 1.
DR PROSITE; PS01166; RNA_POL_BETA; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase; Nucleotidyltransferase; Reference proteome;
KW Transcription; Transferase.
FT CHAIN 1..1273
FT /note="DNA-directed RNA polymerase subunit beta"
FT /id="PRO_1000165815"
SQ SEQUENCE 1273 AA; 144954 MW; 35E644676977E568 CRC64;
MEYRNIKYGT KTERRNYSKM NYDIELPNLI EIQTKSFELF LKEGIKKILK DISPIESNNG
DLKLYFDDFY LDKPKYNIEE AKNRDITYYA QLFAKARLEN VLTKEIKESN ILITELPLIT
PSGTFIINGT ERVVISQIVR SSGIYFTKKF DSKIRYLAQL IPTRGAWIEY EQSNKDFLYA
KLDRSKKIPL NKFICCLGFD TKEKIESTFG YNKFLDLSLK KDQILNINEA IIELHSKLHR
GEKVPVDVAR EFIFSKLFYA KKYDLLAVGR YKFNQKLDVL KRIKNTYLAK DLIDPETNEI
FLSKKTFLNE EIIEKLKNKR NCFTFELVNA DNNLENEINE EILTYANYNK DKILELYIKD
NIINIKTGEI LVEKDTLITE QVMNIIRKNG QFIHDKVSKY FLCNKDLYQK HKERKGVFNE
VLEVYILDNL GNPKPTIKVI GNIQSENNKQ HITVSDIIAS ISYYLNLYED IGKTDDIDHL
GNRRLRLIGE LLTNQFRLGL IISEKNIKDK MSISKFNNIT VNSLVNFTSL SAIIKTFFNS
SRLSHFMDQI NPLAELTQKR RVSALGTGGI DRDRAGIEIR DINNSHYAKL CPIETPEGPS
IGLIASLSTY ARVDKYCFIQ TPYLKVIKNE QGQPKVSEHI DYLTADQEEK EVIASVTYLN
SDNTFKEKKI IARKNGETGL HEIDKITYID VSPKQIVSVA TSSIPFLEHN DASRALMGAN
MQRQAVPLLI PESPIVGTGI EHRIAKDSGC LILAKNSGYV TYADAQKIVI TEKPKKTITI
NNEVIYKNEE EFNYEKAKIL HKKNVFSCQT EYKLINFAKS NQDTLILQKP LVLDGDFVNK
NDIITDGPAT HKEELALGRN VTVAFMTWEG YNYEDAIIIS EDLVKNDIYT SVHIDKYEIQ
TRELKKGAGV EQITREVPNV SAEAIKNLDE RGIIIPGSEV KEGDILVGKI TSQGMVEQTA
YERLINVIIG EKSREHKDSS LRVPCGEGGI VQSVKYFSKE NNDILPPEVN ENIRVYIAKK
RKIKEGDKIA GRHGNKGVIS LILPKEDLPY MKDGTTIDII LNPLGVPSRM NIGQILEMHL
GIAAQKLNIK VATPVFDGVN NDDLRKIIKE AKLSLDGKMT LYDGRTGEPF DSSISVGVMY
MIKLSHMVED KLHSRNIGPY TLMAQQPMGG RNQNGGQRFG EMEVWSLYAY GAANSLQEIL
TIKSDDIIGR QKTYSAITNG LPLPKPSIPE SFRVFAKELQ ALGLYVELIN SKTKENEILK
SLVENQKKGS NNR