RPOB_THEAB
ID RPOB_THEAB Reviewed; 1172 AA.
AC B7ICR3;
DT 14-APR-2009, integrated into UniProtKB/Swiss-Prot.
DT 10-FEB-2009, sequence version 1.
DT 03-AUG-2022, entry version 91.
DE RecName: Full=DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};
DE AltName: Full=RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE AltName: Full=Transcriptase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
GN Name=rpoB {ECO:0000255|HAMAP-Rule:MF_01321}; OrderedLocusNames=THA_1345;
OS Thermosipho africanus (strain TCF52B).
OC Bacteria; Thermotogae; Thermotogales; Fervidobacteriaceae; Thermosipho.
OX NCBI_TaxID=484019;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=TCF52B;
RX PubMed=19124572; DOI=10.1128/jb.01448-08;
RA Nesboe C.L., Bapteste E., Curtis B., Dahle H., Lopez P., Macleod D.,
RA Dlutek M., Bowman S., Zhaxybayeva O., Birkeland N.-K., Doolittle W.F.;
RT "The genome of Thermosipho africanus TCF52B: lateral genetic connections to
RT the Firmicutes and Archaea.";
RL J. Bacteriol. 191:1974-1978(2009).
CC -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of
CC DNA into RNA using the four ribonucleoside triphosphates as substrates.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.6; Evidence={ECO:0000255|HAMAP-Rule:MF_01321};
CC -!- SUBUNIT: The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta'
CC and 1 omega subunit. When a sigma factor is associated with the core
CC the holoenzyme is formed, which can initiate transcription.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
CC -!- SIMILARITY: Belongs to the RNA polymerase beta chain family.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
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DR EMBL; CP001185; ACJ75790.1; -; Genomic_DNA.
DR RefSeq; WP_012580163.1; NC_011653.1.
DR AlphaFoldDB; B7ICR3; -.
DR SMR; B7ICR3; -.
DR STRING; 484019.THA_1345; -.
DR EnsemblBacteria; ACJ75790; ACJ75790; THA_1345.
DR KEGG; taf:THA_1345; -.
DR eggNOG; COG0085; Bacteria.
DR HOGENOM; CLU_000524_4_3_0; -.
DR OMA; FMTWEGY; -.
DR OrthoDB; 9601at2; -.
DR Proteomes; UP000002453; Chromosome.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0032549; F:ribonucleoside binding; IEA:InterPro.
DR GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR CDD; cd00653; RNA_pol_B_RPB2; 1.
DR Gene3D; 2.30.150.10; -; 1.
DR Gene3D; 2.40.270.10; -; 1.
DR Gene3D; 2.40.50.150; -; 1.
DR HAMAP; MF_01321; RNApol_bact_RpoB; 1.
DR InterPro; IPR042107; DNA-dir_RNA_pol_bsu_ext_1_sf.
DR InterPro; IPR019462; DNA-dir_RNA_pol_bsu_external_1.
DR InterPro; IPR015712; DNA-dir_RNA_pol_su2.
DR InterPro; IPR007120; DNA-dir_RNAP_su2_dom.
DR InterPro; IPR037033; DNA-dir_RNAP_su2_hyb_sf.
DR InterPro; IPR010243; RNA_pol_bsu_bac.
DR InterPro; IPR007121; RNA_pol_bsu_CS.
DR InterPro; IPR007644; RNA_pol_bsu_protrusion.
DR InterPro; IPR007645; RNA_pol_Rpb2_3.
DR InterPro; IPR007641; RNA_pol_Rpb2_7.
DR InterPro; IPR014724; RNA_pol_RPB2_OB-fold.
DR PANTHER; PTHR20856; PTHR20856; 1.
DR Pfam; PF04563; RNA_pol_Rpb2_1; 1.
DR Pfam; PF04565; RNA_pol_Rpb2_3; 1.
DR Pfam; PF10385; RNA_pol_Rpb2_45; 1.
DR Pfam; PF00562; RNA_pol_Rpb2_6; 1.
DR Pfam; PF04560; RNA_pol_Rpb2_7; 1.
DR TIGRFAMs; TIGR02013; rpoB; 1.
DR PROSITE; PS01166; RNA_POL_BETA; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase; Nucleotidyltransferase; Reference proteome;
KW Transcription; Transferase.
FT CHAIN 1..1172
FT /note="DNA-directed RNA polymerase subunit beta"
FT /id="PRO_1000141745"
SQ SEQUENCE 1172 AA; 132196 MW; 3FF4E81F5FB0D67E CRC64;
MKEIKSGKRT RFSFGRVQAP IPVPNLVEIQ TKSYQDFLEN GILKVLKKFS PITSSKSDLR
KEKGFSLEFV SVRVGEPQNT VQECKERLLT YTVPVYTTVR ITDNSTNEMI EEEAFLGYLP
YMTPRTTFII NGAERVVVNQ LVRSPGIYFV EEPRKTSGTR PIYVAHFLPV RGAWLEILLN
LNDEVFYARI DRKRRVNLFL LLKALGYSDD LKLLSLFPQW IDVDDEYTLM HSEGLVVLED
VKTKSGELIA KRGDVITQGL IEKLANSEIE KIKVAHRYAV NTLEKLKHTY GDDVEENRAY
IEIFRKLRPG ELPRINAAKI FLNNLYFNEE RFELSEVGRF KMNNRLEEAY RKYLIDVEGK
SPEEVEGVKY TETSNVLTPM DIVLASRNLI EIDKHPGTMD TKDHLGNKRV RTVGELIRIE
FERAFSKAVF MIQEKLATYT SLDKISVQSL INVRSIIATI NSFFATNPLS QFMDQTNPLA
ELTHKRRLTA VGPGGLKRER ARFEVRDVHH SHYGRMCPIE TPEGANIGLI TSLSVYSTID
KYGFLITPYV KVVKGKVTDE IVYLTADEEE NYKIAPSTTP VDEEGNIIPE NVTVRYEEKV
LYVSKYDVQF LDVAPNQIVS VSTSLIPFLE HDDANRALMG SNMQRQGVPL IETEAPRVGT
GMEWEAAKYS GTLVLAKHDG IVKKVDANKI IIHRIDENGK EMYDSMGNPV LDTYELLKFT
RTNQDTCINQ RPIVNVGEVV KKDDPIADGP ATDMGELALG KNVLVAFVPW EGYNFEDAIL
ISEELLEKET YTSVHIEVYE TTARDTRLGP EEITPDIPNV SKEKLRNLDE DGIIRIGAYV
QETDILVGKV TPKSESDTTP EEKIIRSVFG EKGKEVKDSS LRVPHGIEGR VIAVHVFDKE
KDGDLGPGVN KLIRVYVAIR KPLEVGDKLA GRHGNKGVVS KILPKEDMPF LPDGTPVQVV
LSPLGVPSRM NVGQILETSL GWLAMLTNKW FATPVFDGAK EKDILPELYK ARKKLGLEVG
DDENNPTGKV TLRDGRTGLE FDHPILVGYM YVMKLIHIAR DKIHARSTGP YSLIHQQPLG
GKAQFGGQRF GEMEVWALEA YGAAHTLNEM LTVKSDDIMG RNEVYKAIMK GKNIPDPGLP
ESFKVLVREL RGIALDVRVY DSEGNEIDIE KL