RPOB_WOLPI
ID RPOB_WOLPI Reviewed; 1436 AA.
AC Q93MK7;
DT 16-JAN-2004, integrated into UniProtKB/Swiss-Prot.
DT 01-DEC-2001, sequence version 1.
DT 03-AUG-2022, entry version 79.
DE RecName: Full=DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};
DE AltName: Full=RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
DE AltName: Full=Transcriptase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};
GN Name=rpoB {ECO:0000255|HAMAP-Rule:MF_01321};
OS Wolbachia pipientis.
OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales;
OC Anaplasmataceae; Wolbachieae; Wolbachia.
OX NCBI_TaxID=955;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=O'Neill;
RX PubMed=12710612; DOI=10.1099/ijs.0.02411-0;
RA Taillardat-Bisch A.V., Raoult D., Drancourt M.;
RT "RNA polymerase beta-subunit-based phylogeny of Ehrlichia spp., Anaplasma
RT spp., Neorickettsia spp. and Wolbachia pipientis.";
RL Int. J. Syst. Evol. Microbiol. 53:455-458(2003).
CC -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of
CC DNA into RNA using the four ribonucleoside triphosphates as substrates.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.6; Evidence={ECO:0000255|HAMAP-Rule:MF_01321};
CC -!- SUBUNIT: The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta'
CC and 1 omega subunit. When a sigma factor is associated with the core
CC the holoenzyme is formed, which can initiate transcription.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
CC -!- SIMILARITY: Belongs to the RNA polymerase beta chain family.
CC {ECO:0000255|HAMAP-Rule:MF_01321}.
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DR EMBL; AF401090; AAK83926.1; -; Genomic_DNA.
DR AlphaFoldDB; Q93MK7; -.
DR SMR; Q93MK7; -.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0032549; F:ribonucleoside binding; IEA:InterPro.
DR GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR CDD; cd00653; RNA_pol_B_RPB2; 1.
DR Gene3D; 2.30.150.10; -; 1.
DR Gene3D; 2.40.270.10; -; 1.
DR Gene3D; 2.40.50.150; -; 1.
DR Gene3D; 3.90.1110.10; -; 1.
DR HAMAP; MF_01321; RNApol_bact_RpoB; 1.
DR InterPro; IPR042107; DNA-dir_RNA_pol_bsu_ext_1_sf.
DR InterPro; IPR019462; DNA-dir_RNA_pol_bsu_external_1.
DR InterPro; IPR015712; DNA-dir_RNA_pol_su2.
DR InterPro; IPR007120; DNA-dir_RNAP_su2_dom.
DR InterPro; IPR037033; DNA-dir_RNAP_su2_hyb_sf.
DR InterPro; IPR010243; RNA_pol_bsu_bac.
DR InterPro; IPR007121; RNA_pol_bsu_CS.
DR InterPro; IPR007644; RNA_pol_bsu_protrusion.
DR InterPro; IPR007642; RNA_pol_Rpb2_2.
DR InterPro; IPR037034; RNA_pol_Rpb2_2_sf.
DR InterPro; IPR007645; RNA_pol_Rpb2_3.
DR InterPro; IPR007641; RNA_pol_Rpb2_7.
DR InterPro; IPR014724; RNA_pol_RPB2_OB-fold.
DR PANTHER; PTHR20856; PTHR20856; 1.
DR Pfam; PF04563; RNA_pol_Rpb2_1; 1.
DR Pfam; PF04561; RNA_pol_Rpb2_2; 2.
DR Pfam; PF04565; RNA_pol_Rpb2_3; 1.
DR Pfam; PF10385; RNA_pol_Rpb2_45; 1.
DR Pfam; PF00562; RNA_pol_Rpb2_6; 1.
DR Pfam; PF04560; RNA_pol_Rpb2_7; 1.
DR TIGRFAMs; TIGR02013; rpoB; 1.
DR PROSITE; PS01166; RNA_POL_BETA; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase; Nucleotidyltransferase; Transcription;
KW Transferase.
FT CHAIN 1..1436
FT /note="DNA-directed RNA polymerase subunit beta"
FT /id="PRO_0000047997"
SQ SEQUENCE 1436 AA; 161619 MW; FD371036E3EAF22F CRC64;
MSSAGDSGPG YVLNDFDAVP RGTRGRRPGL VKDSLLDLVK VQKGSYNSFT PNNESNERLE
AIFHTIFPIS DPLHRATIEF LNCRVDDLKY SESECIKRGI TFSAQVIASI RLVIMQDGVS
LEKYQEIKEY DDHSKLATVI KSAEEQEVRF CELPMMTDKG TFIINGVEKV IVSQMHRSPG
VFFDSDKGKT YNSGKLIYSA RVIPYRGSWL DIEFDVKDHL YFRIDRKRKL PISVLLKALG
LSNNDILNKF MKNRVYKHKS GWKVPFFPDK FKGVRLPFDL KNVEGNVLLK ANVRITSKLA
KNLYDNGLKE YLIPYDSICG LFLAEDLIDS ASSTKILSAG ESIKLEDIKK LELLSIDKIS
VLNIDNVSVG PYILNTLFLD ENMSYENALY EIYKVLRPGE VPVLKIVEEF FRNLFFSPEY
YDLSNIGRLK LNSCLGLNYE ENLTTLTHED IIEIIRKIVL LRDGQGSVDD DIDHLANRRV
RSVGEFIENQ FRTGLLKLGR AVVDSMSTSS LDKVSPSDFI NPKVLTNVLR DFFNSSQLSQ
FMDQTNPLSE ITHKRRLSAL GPGGLTRERA GFEVRDVHPT HYGRICPIET PEQNIAYNSL
AIYARINKYG FIESPYRKVV NKVVTDQIEY LSAIDEGLYY IADTSAKLDE NNCFVDDMLY
CRYAGTFVMV NSNQVSYIDL SPKQVISVAA SLIPFLENDD ANRALMGSNM QRQAVPLLKP
TAPLVATGME SFVASGSGAV VLAKRGGIVD SSDSNSIVIR AFDKGGINYL DVDIYHLRKF
QRSNHNTCIN QKPLVHVGDC VKEGDVIADG PAINNGELAL GQNLLVAFMS WQGYNFEDSI
IISSEVVKKD LFTSIHIEEF ECVVHDTPLG SEKITRAIPG VNEENLYHLD DSGIVKVGTR
VGPGYILVGK VTPRHSLSLP PETKLLMTIF GEKSFDCVDS SLYTSPDIEG IVIDVQVFTR
RGEEENERAF LIKQKEANDF EKERDHIINV INQYFYDELR KILINSGSQD RESINFIERE
GWWDIGLKNQ SISKQVESLK KDFDEKVSHA ITNFKRKVEK LHEGYDLPQG VSMSVKVFIA
VKHSLQPGDK MAGRHGNKGV ISRVVPVEDM PYLEDGTPID IILNPLGVPS RMNVGQMLET
HVGWACKKLG EKVGNILDEI NKIKRAFCEA IRSLSDDDFE KFAALYLDNK KFEDINDDEI
TASILDTPNK DELNNELTTL VENYFNSCKD AHSSLRHFLI EVYSCGSNLS ICNNIRDIND
NHLIEFAYKL RDGIPVTAPV FEGPKDEQIV KLFELAGLDN SGQVVLYDGC SGEKFDRKVT
VGYMYMLKLH HLVDGKIHAR SVGPYSLVTQ QPLGGKSHFG GQRFGEMECW ALQAYGAAYT
LQEMLTVKSD DINGRVKIYE SVIKGDSNFE CGIPESFNVM IKELRSLCFN VDLNAK