RPOC2_NOSCO
ID RPOC2_NOSCO Reviewed; 717 AA.
AC P14564;
DT 01-JAN-1990, integrated into UniProtKB/Swiss-Prot.
DT 01-JAN-1990, sequence version 1.
DT 03-AUG-2022, entry version 76.
DE RecName: Full=DNA-directed RNA polymerase subunit beta';
DE Short=RNAP subunit beta';
DE EC=2.7.7.6;
DE AltName: Full=RNA polymerase subunit beta';
DE AltName: Full=Transcriptase subunit beta';
DE Flags: Fragment;
GN Name=rpoC2;
OS Nostoc commune.
OC Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.
OX NCBI_TaxID=1178;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=UTEX 584 / SAG 1453-5;
RX PubMed=2495268; DOI=10.1128/jb.171.4.1967-1973.1989;
RA Xie W.-Q., Jaeger K., Potts M.;
RT "Cyanobacterial RNA polymerase genes rpoC1 and rpoC2 correspond to rpoC of
RT Escherichia coli.";
RL J. Bacteriol. 171:1967-1973(1989).
CC -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of
CC DNA into RNA using the four ribonucleoside triphosphates as substrates.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.6; Evidence={ECO:0000250|UniProtKB:P0A8T7};
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC Evidence={ECO:0000250|UniProtKB:P0A8T7};
CC Note=Binds 1 Zn(2+) ion per subunit. {ECO:0000250|UniProtKB:P0A8T7};
CC -!- SUBUNIT: In cyanobacteria the RNAP catalytic core is composed of 2
CC alpha, 1 beta, 1 beta', 1 gamma and 1 omega subunit. When a sigma
CC factor is associated with the core the holoenzyme is formed, which can
CC initiate transcription (By similarity). {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the RNA polymerase beta' chain family. RpoC2
CC subfamily. {ECO:0000305}.
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DR EMBL; M29747; AAA25518.1; -; Genomic_DNA.
DR PIR; B32838; B32838.
DR AlphaFoldDB; P14564; -.
DR SMR; P14564; -.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006351; P:transcription, DNA-templated; IEA:InterPro.
DR Gene3D; 1.10.132.30; -; 1.
DR Gene3D; 1.10.274.100; -; 1.
DR InterPro; IPR012756; DNA-dir_RpoC2_beta_pp.
DR InterPro; IPR045867; DNA-dir_RpoC_beta_prime.
DR InterPro; IPR007066; RNA_pol_Rpb1_3.
DR InterPro; IPR042102; RNA_pol_Rpb1_3_sf.
DR InterPro; IPR007083; RNA_pol_Rpb1_4.
DR InterPro; IPR007081; RNA_pol_Rpb1_5.
DR InterPro; IPR038120; Rpb1_funnel_sf.
DR PANTHER; PTHR19376; PTHR19376; 1.
DR Pfam; PF04983; RNA_pol_Rpb1_3; 1.
DR Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR Pfam; PF04998; RNA_pol_Rpb1_5; 1.
DR TIGRFAMs; TIGR02388; rpoC2_cyan; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase; Metal-binding; Nucleotidyltransferase;
KW Transcription; Transferase; Zinc.
FT CHAIN 1..>717
FT /note="DNA-directed RNA polymerase subunit beta'"
FT /id="PRO_0000067904"
FT BINDING 218
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250|UniProtKB:P0A8T7"
FT BINDING 291
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250|UniProtKB:P0A8T7"
FT BINDING 298
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250|UniProtKB:P0A8T7"
FT BINDING 301
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250|UniProtKB:P0A8T7"
FT NON_TER 717
SQ SEQUENCE 717 AA; 78244 MW; E5505A9FA37D3C91 CRC64;
MTNEKMIFRN RVVDKGQLRN LISWAFTYYG TARTAVMADK LKDLGFRYAT KAGVSISVDD
LMVPPTKRLL LEAAEEEIRA TETRYQRGEI TEVERFQKVI DTWNGTSEAL KDEVVVHFKK
TNPLSSVYMM AFSGARGNIS QVRQLVGMRG LMADPQGEII DLPIKTNFRE GLTVTEYIIS
SYGARKGLVV QPSRTADSGY LTRRLVDVSQ VYYSGFDCGT PELSIRPMTE GAKTLIPLAT
RLMGRVIGED VLHPVTKEVI AARNSPISED LAKKIEKSGV GEVVVRSPLT CEAARSVCQH
CYGWSLAHAS MVDLGEAVGI IAAQSIGEPG TQLTMRTFHT GGVFTGEVAQ QVRSKIDGTV
KLPRKLKTRT YRTRHGEDAL YVEANGIMLL EPTKVGDVTP ENQEVHLTQG STLYVFDGNK
VNKVQLLAEV ALGGRTTRTN TEKAVKDVAS DLAGEVQFAE VVPEQKTDRQ GNTTTTRRTR
GLIWILSGEV YNLPPGAELV VKNGDAIASN GVLAETKLAS LHGGVVRLPE ATPGKSTREI
EIITASVVLD QATVTVQSSQ GRNNYLVSTG NNQVFNLRAT PGTKVQNGQV VAELIDDRYR
TTTGGFLKFA GVEVQKKGKA KLGYEVVQGG TCCGSPEESH EVNKDISLLL VEDGQFVEAG
TEVVKDIFCQ NSGVVEVTQK NDILREVVVK PGELLIVDDP ESVIGRDNTF IQPGEEF