RPOE_UREPA
ID RPOE_UREPA Reviewed; 160 AA.
AC Q9PPP2;
DT 04-MAY-2001, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 93.
DE RecName: Full=Probable DNA-directed RNA polymerase subunit delta;
DE AltName: Full=RNAP delta factor;
GN Name=rpoE; OrderedLocusNames=UU597;
OS Ureaplasma parvum serovar 3 (strain ATCC 700970).
OC Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Ureaplasma.
OX NCBI_TaxID=273119;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700970;
RX PubMed=11048724; DOI=10.1038/35037619;
RA Glass J.I., Lefkowitz E.J., Glass J.S., Heiner C.R., Chen E.Y.,
RA Cassell G.H.;
RT "The complete sequence of the mucosal pathogen Ureaplasma urealyticum.";
RL Nature 407:757-762(2000).
CC -!- FUNCTION: Participates in both the initiation and recycling phases of
CC transcription. In the presence of the delta subunit, RNAP displays an
CC increased specificity of transcription, a decreased affinity for
CC nucleic acids, and an increased efficiency of RNA synthesis because of
CC enhanced recycling (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: RNAP is composed of a core of 2 alpha, a beta and a beta'
CC subunits. The core is associated with a delta subunit and one of
CC several sigma factors (By similarity). {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the RpoE family. {ECO:0000305}.
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DR EMBL; AF222894; AAF31011.1; -; Genomic_DNA.
DR RefSeq; WP_006688513.1; NC_002162.1.
DR AlphaFoldDB; Q9PPP2; -.
DR SMR; Q9PPP2; -.
DR STRING; 273119.UU597; -.
DR EnsemblBacteria; AAF31011; AAF31011; UU597.
DR GeneID; 29672359; -.
DR KEGG; uur:UU597; -.
DR eggNOG; COG3343; Bacteria.
DR HOGENOM; CLU_1651434_0_0_14; -.
DR OMA; ENWIGFF; -.
DR Proteomes; UP000000423; Chromosome.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR GO; GO:0006351; P:transcription, DNA-templated; IEA:InterPro.
DR Gene3D; 1.10.10.1250; -; 1.
DR HAMAP; MF_00357; RNApol_bact_RpoE; 1.
DR InterPro; IPR007759; Asxl_HARE-HTH.
DR InterPro; IPR038087; RNAP_delta_N_dom_sf.
DR InterPro; IPR029757; RpoE.
DR TIGRFAMs; TIGR04567; RNAP_delt_lowGC; 1.
DR PROSITE; PS51913; HTH_HARE; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase; Nucleotidyltransferase; Reference proteome;
KW Transcription; Transferase.
FT CHAIN 1..160
FT /note="Probable DNA-directed RNA polymerase subunit delta"
FT /id="PRO_0000204335"
FT DOMAIN 3..74
FT /note="HTH HARE-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01261"
FT REGION 94..160
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 94..122
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 160 AA; 18770 MW; 79B5FCDC7AB5A4CF CRC64;
MSRQLVDIAY NAIKNNKIYN KKPFTFDDII NEIVKNSNVN LVEVNSQLGV LYTTLIQDTR
FISIGDLEWN LRERLSLDEI TKINNAMYEV GLYKDSDREE DEHEIVKNDK LTQSKEQEES
DEVSSLSDFV GYEDEDEEFK NNNTSNKDEI EDEEELEEEE